Strain identifier

BacDive ID: 132729

Type strain: No

Species: Enterobacter sp.

Strain Designation: J49

Strain history: <- L. Ludueña; Universidad Nacional de Rio Cuarto, Rio Cuarto, Argentina; J49 <- T. Taurian, National University of Rio Cuarto

NCBI tax ID(s): 42895 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 8.1 (current version)

General

@ref: 24519

BacDive-ID: 132729

DSM-Number: 105031

keywords: genome sequence, Bacteria, mesophilic

description: Enterobacter sp. J49 is a mesophilic bacterium that was isolated from peanut nodules .

NCBI tax id

  • NCBI tax id: 42895
  • Matching level: species

strain history

  • @ref: 24519
  • history: <- L. Ludueña; Universidad Nacional de Rio Cuarto, Rio Cuarto, Argentina; J49 <- T. Taurian, National University of Rio Cuarto

doi: 10.13145/bacdive132729.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Enterobacter
  • species: Enterobacter sp.
  • full scientific name: Enterobacter Hormaeche and Edwards 1960 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Cloaca

@ref: 24519

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Enterobacteriaceae

genus: Enterobacter

species: Enterobacter sp.

full scientific name: Enterobacter sp.

strain designation: J49

type strain: no

Morphology

multimedia

  • @ref: 24519
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_105031.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
24519LB (Luria-Bertani) MEDIUM (DSMZ Medium 381)yeshttps://mediadive.dsmz.de/medium/381Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water
24519NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 24519
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose+fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose+fermentation
6836830911sorbitol+fermentation
6836817268myo-inositol+fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan-energy source
6836816199urea-hydrolysis
6836816947citrate+assimilation
6836818257ornithine+degradation
6836825094lysine-degradation
6836829016arginine+hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836815688acetoinyes
6836835581indoleno
6836816136hydrogen sulfideno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6836815688acetoin+
6836835581indole-

enzymes

@refvalueactivityec
68368cytochrome oxidase-1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease-3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase+3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
24519++-++----+-+++++++++-

Isolation, sampling and environmental information

isolation

  • @ref: 24519
  • sample type: peanut nodules (inner tissues)
  • geographic location: Rio Cuarto (Latitude: -33.1333, Longitude: -64.35)
  • country: Argentina
  • origin.country: ARG
  • continent: Middle and South America
  • latitude: -33.1333
  • longitude: -64.35

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root nodule

Sequence information

Genome sequences

  • @ref: 66792
  • description: Enterobacter sp. J49
  • accession: GCA_002148625
  • assembly level: contig
  • database: ncbi
  • NCBI tax ID: 1903627

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
flagellatedno59.008no
gram-positiveno97.563no
anaerobicno96.568no
halophileno86.343no
spore-formingno93.686no
glucose-utilyes94.676no
aerobicyes88.389no
thermophileno99.516yes
motileyes88.121no
glucose-fermentyes92.971yes

External links

@ref: 24519

culture collection no.: DSM 105031

straininfo link

  • @ref: 91033
  • straininfo: 407356

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24519Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-105031Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 105031)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
68368Automatically annotated from API 20E
91033Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID407356.1