Strain identifier

BacDive ID: 132727

Type strain: No

Species: Desulfovibrio intestinalis

Strain Designation: K62

Strain history: <- A. I. Qatibi, Cadi Ayyad Univ., Marrakech, Morocco; K62 <- A. I. Qatibi {2005}

NCBI tax ID(s): 58621 (species)

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General

@ref: 24517

BacDive-ID: 132727

DSM-Number: 21222

keywords: 16S sequence, Bacteria

description: Desulfovibrio intestinalis K62 is a bacterium that was isolated from pond of olive mill wastewater.

NCBI tax id

  • NCBI tax id: 58621
  • Matching level: species

strain history

  • @ref: 24517
  • history: <- A. I. Qatibi, Cadi Ayyad Univ., Marrakech, Morocco; K62 <- A. I. Qatibi {2005}

doi: 10.13145/bacdive132727.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Desulfovibrionales
  • family: Desulfovibrionaceae
  • genus: Desulfovibrio
  • species: Desulfovibrio intestinalis
  • full scientific name: Desulfovibrio intestinalis Fröhlich et al. 1999

@ref: 24517

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfovibrionales

family: Desulfovibrionaceae

genus: Desulfovibrio

species: Desulfovibrio intestinalis

full scientific name: Desulfovibrio intestinalis Fröhlich et al. 1999

strain designation: K62

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
24517DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641)yeshttps://mediadive.dsmz.de/medium/641Name: DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641) Composition: Na-DL-lactate 2.49252 g/l Na2SO4 1.99402 g/l NH4Cl 0.997009 g/l Yeast extract 0.997009 g/l Na2CO3 0.997009 g/l MgSO4 x 7 H2O 0.997009 g/l Na2S2O3 x 5 H2O 0.997009 g/l KH2PO4 0.498504 g/l Na2S x 9 H2O 0.0997009 g/l CaCl2 x 2 H2O 0.0997009 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
24517DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63)yeshttps://mediadive.dsmz.de/medium/63Name: DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63) Composition: MgSO4 x 7 H2O 2.0 g/l Na-DL-lactate 2.0 g/l NH4Cl 1.0 g/l Yeast extract 1.0 g/l Na2SO4 1.0 g/l FeSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l CaCl2 x 2 H2O 0.1 g/l Na-thioglycolate 0.1 g/l Ascorbic acid 0.1 g/l Sodium resazurin 0.0005 g/l Distilled water

culture temp

  • @ref: 24517
  • growth: positive
  • type: growth
  • temperature: 37

Isolation, sampling and environmental information

isolation

  • @ref: 24517
  • sample type: pond of olive mill wastewater
  • geographic location: Marrakech
  • country: Morocco
  • origin.country: MAR
  • continent: Africa

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial
#Engineered#Waste#Industrial wastewater
#Environmental#Aquatic#Pond (small)

taxonmaps

  • @ref: 69479
  • File name: preview.99_24656.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_139;96_2534;97_3095;98_18547;99_24656&stattab=map
  • Last taxonomy: Desulfovibrio simplex
  • 16S sequence: EU190359
  • Sequence Identity:
  • Total samples: 987
  • soil counts: 17
  • aquatic counts: 688
  • animal counts: 256
  • plant counts: 26

Safety information

risk assessment

  • @ref: 24517
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24517
  • description: Desulfovibrio intestinalis strain K62 16S ribosomal RNA gene, partial sequence
  • accession: EU190359
  • length: 1370
  • database: nuccore
  • NCBI tax ID: 58621

External links

@ref: 24517

culture collection no.: DSM 21222

straininfo link

  • @ref: 91031
  • straininfo: 399399

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24517Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-21222Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21222)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
91031Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399399.1