Strain identifier

BacDive ID: 132450

Type strain: Yes

Species: Mobilisporobacter senegalensis

Strain Designation: Gal1

Strain history: M. Mbengue Gal1.

NCBI tax ID(s): 1329262 (species)

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General

@ref: 24239

BacDive-ID: 132450

DSM-Number: 26537

keywords: genome sequence, 16S sequence, Bacteria, obligate anaerobe, spore-forming, Gram-positive, motile, rod-shaped

description: Mobilisporobacter senegalensis Gal1 is an obligate anaerobe, spore-forming, Gram-positive bacterium that was isolated from tropical shea cake, a waste material from the production of shea butter.

NCBI tax id

  • NCBI tax id: 1329262
  • Matching level: species

strain history

@refhistory
24239<- M. Mbengue, Lab. Microbiol. de IRD-MIO, Marseille, France; Gal1 <- M. Mbengue {2003}
67770M. Mbengue Gal1.

doi: 10.13145/bacdive132450.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Lachnospiraceae
  • genus: Mobilisporobacter
  • species: Mobilisporobacter senegalensis
  • full scientific name: Mobilisporobacter senegalensis Mbengue et al. 2016

@ref: 24239

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Lachnospiraceae

genus: Mobilisporobacter

species: Mobilisporobacter senegalensis

full scientific name: Mobilisporobacter senegalensis Mbengue et al. 2016

strain designation: Gal1

type strain: yes

Morphology

cell morphology

@refgram staincell lengthcell widthcell shapemotilityflagellum arrangementconfidence
43731positive2-4 µm0.2-0.4 µmrod-shapedyesperitrichous
69480positive100

Culture and growth conditions

culture medium

  • @ref: 24239
  • name: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/311c
  • composition: Name: SPOROMUSA ACIDOVORANS MEDIUM (DSMZ Medium 311c; with strain-specific modifications) Composition: D-Glucose 4.97512 g/l NaCl 2.23881 g/l Yeast extract 1.99005 g/l Casitone 1.99005 g/l Na2CO3 0.995025 g/l NH4Cl 0.497512 g/l MgSO4 x 7 H2O 0.497512 g/l K2HPO4 0.348259 g/l Na2S x 9 H2O 0.298507 g/l L-Cysteine HCl x H2O 0.298507 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l Sodium resazurin 0.000497512 g/l NaOH 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l Pyridoxine hydrochloride 9.95025e-05 g/l MnCl2 x 4 H2O 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Riboflavin 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Biotin 1.99005e-05 g/l Folic acid 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
43731positivegrowth15-45
43731positiveoptimum30mesophilic
24239positivegrowth30mesophilic
67770positivegrowth30mesophilic

culture pH

@refabilitytypepHPH range
43731positivegrowth6.5-9.3alkaliphile
43731positiveoptimum7.8

Physiology and metabolism

oxygen tolerance

@refoxygen toleranceconfidence
43731obligate anaerobe
69480anaerobe99.459

spore formation

@refspore descriptiontype of sporespore formationconfidence
43731terminal to subterminalendosporeyes
69481yes100
69480yes99.447

halophily

@refsaltgrowthtested relationconcentration
43731NaClpositivegrowth0-3.5 %
43731NaClpositiveoptimum1 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
437314853esculin-hydrolysis
437315291gelatin-hydrolysis
4373122599arabinose+fermentation
4373117057cellobiose+fermentation
4373128757fructose+fermentation
4373117234glucose+fermentation
4373117716lactose+fermentation
4373117306maltose+fermentation
4373129864mannitol+fermentation
4373137684mannose+fermentation
4373117992sucrose+fermentation
4373127082trehalose+fermentation
43731yeast extract+required for growth

metabolite production

  • @ref: 43731
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
43731cytochrome oxidase-1.9.3.1
43731catalase-1.11.1.6

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
24239tropical shea cake, a waste material from the production of shea butterRégion de Kédougou, SarayaSenegalSENAfrica
43731Tropical shea cakeSarayaSenegalSENAfrica
67770Shea cake, a waste material from the production of shea butterSarayaSenegalSENAfrica

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste
#Engineered#Industrial#Industrial production

Safety information

risk assessment

  • @ref: 24239
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24239
  • description: Mobilisporobacter senegalensis strain Gal1 16S ribosomal RNA gene, partial sequence
  • accession: JX999366
  • length: 1589
  • database: ena
  • NCBI tax ID: 1329262

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Mobilisporobacter senegalensis strain DSM 265371329262.3wgspatric1329262
66792Mobilisporobacter senegalensis DSM 265372788499849draftimg1329262
67770Mobilisporobacter senegalensis DSM 26537GCA_003752155contigncbi1329262

GC content

  • @ref: 24239
  • GC-content: 33.8
  • method: high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes100no
motileyes83.63no
gram-positiveyes79.121yes
anaerobicyes99.222yes
halophileno93.645yes
spore-formingyes94.764yes
glucose-utilyes88.666no
aerobicno98.562yes
flagellatedyes80.606yes
thermophileno95.51yes
glucose-fermentyes84.263yes

External links

@ref: 24239

culture collection no.: DSM 26537, JCM 18753

straininfo link

  • @ref: 90788
  • straininfo: 399693

literature

  • topic: Phylogeny
  • Pubmed-ID: 26755447
  • title: Mobilisporobacter senegalensis gen. nov., sp. nov., an anaerobic bacterium isolated from tropical shea cake.
  • authors: Mbengue M, Thioye A, Labat M, Casalot L, Joseph M, Samb A, Ben Ali Gam Z
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000889
  • year: 2016

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24239Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26537Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26537)
43731Malick Mbengue, Abdoulaye Thioye, Marc Labat, Laurence Casalot, Manon Joseph, Abdoulaye Samb, Zouhaier Ben Ali GamMobilisporobacter senegalensis gen. nov., sp. nov., an anaerobic bacterium isolated from tropical shea cake10.1099/ijsem.0.000889IJSEM 66: 1383-1388 201626755447
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1
90788Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399693.1