Strain identifier

BacDive ID: 132381

Type strain: Yes

Species: Streptosporangium algeriense

Strain Designation: 169

Strain history: <- N. Sabaou, LPBVB, Kouba, Algeria; 169

NCBI tax ID(s): 1682748 (species)

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General

@ref: 24170

BacDive-ID: 132381

DSM-Number: 45455

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive

description: Streptosporangium algeriense 169 is an aerobe, spore-forming, mesophilic bacterium that was isolated from Saharan soil.

NCBI tax id

  • NCBI tax id: 1682748
  • Matching level: species

strain history

  • @ref: 24170
  • history: <- N. Sabaou, LPBVB, Kouba, Algeria; 169

doi: 10.13145/bacdive132381.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptosporangiales
  • family: Streptosporangiaceae
  • genus: Streptosporangium
  • species: Streptosporangium algeriense
  • full scientific name: Streptosporangium algeriense Boubetra et al. 2016

@ref: 24170

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptosporangiaceae

genus: Streptosporangium

species: Streptosporangium algeriense

full scientific name: Streptosporangium algeriense Boubetra et al. 2016

strain designation: 169

type strain: yes

Morphology

cell morphology

  • @ref: 43821
  • gram stain: positive
  • motility: no

colony morphology

  • @ref: 62921
  • incubation period: 7-10 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
24170TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium535.pdf
43821Bennett's mediayes
43821ISP 2yes
43821ISP 4no
24170GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
43821positiveoptimum30mesophilic
62921positivegrowth30mesophilic
24170positivegrowth28mesophilic

culture pH

@refabilitytypepH
43821nogrowth5
43821nogrowth9

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
43821aerobe
62921aerobe

spore formation

  • @ref: 43821
  • spore description: roundish to oval shaped, smooth spores; sessile or carried by very short sporophores
  • type of spore: spore
  • spore formation: yes

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
4382115963ribitol-carbon source
4382116150benzoate-carbon source
4382117968butyrate-carbon source
4382115824D-fructose-carbon source
4382116988D-ribose-carbon source
4382130849L-arabinose-carbon source
4382117716lactose-carbon source
4382117306maltose-carbon source
4382117268myo-inositol-carbon source
4382130623oxalate-carbon source
4382117272propionate-carbon source
4382116634raffinose-carbon source
4382117814salicin-carbon source
4382116708adenine-degradation
4382118305arbutin-degradation
43821casein-degradation
438214853esculin-degradation
4382116235guanine-degradation
4382117368hypoxanthine-degradation
4382128017starch-degradation
4382117347testosterone-degradation
4382115318xanthine-degradation
438215291gelatin+assimilation
4382153426tween 80+assimilation
4382118186tyrosine+assimilation
4382130089acetate+carbon source
4382117057cellobiose+carbon source
4382116947citrate+carbon source
4382112936D-galactose+carbon source
4382117634D-glucose+carbon source
4382116899D-mannitol+carbon source
4382116024D-mannose+carbon source
4382117924D-sorbitol+carbon source
4382165327D-xylose+carbon source
4382117754glycerol+carbon source
4382162345L-rhamnose+carbon source
438216731melezitose+carbon source
4382128053melibiose+carbon source
4382115361pyruvate+carbon source
4382130031succinate+carbon source
4382117992sucrose+carbon source
4382130929tartrate+carbon source
4382116977L-alanine+nitrogen source
4382117203L-proline+nitrogen source
4382117115L-serine+nitrogen source

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistantresistance conc.
4382148923erythromycinyesyes15 µg/mL
4382128368novobiocinyesyes5 µg/mL
4382117698chloramphenicolyesyes30 µg/mL

enzymes

  • @ref: 43821
  • value: nitrate reductase
  • activity: +
  • ec: 1.7.99.4

fatty acid profile

  • fatty acids

    @reffatty acidpercentage
    43821C15:0 anteiso0.3
    43821C17:0 anteiso0.3
    43821C12:00.1
    43821C13:00.5
    43821C14:01.1
    43821C15:03.6
    43821C16:015.6
    43821C16:0-10-methyl6.5
    43821C16:1ω9c1.2
    43821C17:04.3
    4382110-methyl C17:010.8
    43821C17:1ω6c1.4
    43821C17:1ω8c10.1
    43821C18:02
    4382110-methyl C18:03.3
    43821C18:1ω7c1
    43821C18:1ω9c5.8
    43821C14:0 iso6.9
    43821C15:0 iso0.4
    43821C15:0 iso 2OH / C16:1ω7c6.4
    43821C16:0 iso16.9
    43821C16:1 iso H0.7
    43821C17:0 iso0.3
    43821C18:0 iso0.4
  • type of FA analysis: whole cell analysis
  • incubation medium: ISP 2
  • agar/liquid: liquid
  • incubation temperature: 30
  • incubation time: 4
  • incubation_oxygen: aerobic
  • software version: Sherlock 6.1
  • library/peak naming table: TSBA40
  • system: MIS MIDI
  • cutoff value:

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentlatitudelongitudesampling date
24170Saharan soilAdrar palm grove (27° 53' N, 0° 16' E)AlgeriaDZAAfrica27.88330.2666
43821A Saharan soil sample collected from Adrar palm grove (altitude 262 m)Southern AlgeriaAlgeriaDZAAfrica27.88330.266667
62921Soil,Sahara desertAlgerian SaharaAlgeriaDZAAfrica2000

isolation source categories

Cat1Cat2Cat3
#Climate#Hot#Arid
#Engineered#Agriculture#Grove (Orchard)
#Environmental#Terrestrial#Desert
#Environmental#Terrestrial#Soil
#Host#Plants#Tree

Safety information

risk assessment

  • @ref: 24170
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 24170
  • description: Streptosporangium algeriense strain 169 16S ribosomal RNA gene, partial sequence
  • accession: KP974644
  • length: 1505
  • database: ena
  • NCBI tax ID: 1682748

GC content

  • @ref: 24170
  • GC-content: 70.7
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 24170

culture collection no.: DSM 45455, CCUG 62974, MTCC 11561

straininfo link

  • @ref: 90724
  • straininfo: 400375

literature

  • topic: Phylogeny
  • Pubmed-ID: 26647039
  • title: Streptosporangium algeriense sp. nov., an actinobacterium isolated from desert soil.
  • authors: Boubetra D, Bouras N, Zitouni A, Schumann P, Sproer C, Sabaou N, Klenk HP
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.000829
  • year: 2015

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24170Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-45455Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45455)
43821Dalila Boubetra, Noureddine Bouras, Abdelghani Zitouni, Peter Schumann, Cathrin Spröer, Nasserdine Sabaou, Hans-Peter KlenkStreptosporangium algeriense sp. nov., an actinobacterium isolated from desert soil10.1099/ijsem.0.000829IJSEM 66: 1034-1038 201626647039
62921Curators of the CCUGhttps://www.ccug.se/strain?id=62974Culture Collection University of Gothenburg (CCUG) (CCUG 62974)
90724Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID400375.1