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Strain identifier

BacDive ID: 132256

Type strain: Yes

Species: Bartonella ancashensis

Strain Designation: 20.00

Strain history: <- C. Maguiña, Univ. Peruana Cayetano Herdia, Lima, Peru; 20.00 <- Naval Med. Res. Center, Silver Spring, MD, USA <- C. Maguiña and D. Blazes

NCBI tax ID(s): 1318743 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24045

BacDive-ID: 132256

DSM-Number: 29364

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Bartonella ancashensis 20.00 is a mesophilic bacterium that was isolated from blood collected prior to antibiotic treatment from a three-year-old male patient with verruga peruana.

NCBI tax id

  • NCBI tax id: 1318743
  • Matching level: species

strain history: <- C. Maguiña, Univ. Peruana Cayetano Herdia, Lima, Peru; 20.00 <- Naval Med. Res. Center, Silver Spring, MD, USA <- C. Maguiña and D. Blazes

doi: 10.13145/bacdive132256.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Bartonellaceae
  • genus: Bartonella
  • species: Bartonella ancashensis
  • full scientific name: Bartonella ancashensis Mullins et al. 2015
  • synonyms

    @refsynonym
    20215Bartonella ancashensis
    20215Bartonella ancashi

@ref: 24045

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Bartonellaceae

genus: Bartonella

species: Bartonella ancashensis

full scientific name: Bartonella ancashensis Mullins et al. 2015

strain designation: 20.00

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.083

Culture and growth conditions

culture medium

  • @ref: 24045
  • name: FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1203
  • composition: Name: FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203) Composition: Horse blood 100.0 g/l Fastidious Anaerobe Agar 45.7 g/l Distilled water

culture temp

  • @ref: 24045
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 98.706

halophily

  • @ref: 69480
  • halophily level: non-halophilic
  • confidence: 94.848

Isolation, sampling and environmental information

isolation

  • @ref: 24045
  • sample type: blood collected prior to antibiotic treatment from a three-year-old male patient with verruga peruana
  • geographic location: Ancash region, rural setting outside of the town of Caraz
  • country: Peru
  • origin.country: PER
  • continent: Middle and South America
  • latitude: -9.0417
  • longitude: -77.7393

isolation source categories

Cat1Cat2Cat3
#Infection#Patient#Antibiotic treatment
#Infection#Patient
#Infection#Patient
#Host Body Product#Fluids#Blood
#Host#Human#Child
#Host#Human#Male

Sequence information

16S sequences

  • @ref: 24045
  • description: Bartonella ancashensis strain CO20 16S ribosomal RNA gene, partial sequence
  • accession: KC178617
  • length: 1424
  • database: ena
  • NCBI tax ID: 1318743

Genome sequences

  • @ref: 66792
  • description: Bartonella ancashensis 20.00
  • accession: GCA_001281405
  • assembly level: complete
  • database: ncbi
  • NCBI tax ID: 1318743

GC content

  • @ref: 24045
  • GC-content: 38.4
  • method: sequence analysis

External links

@ref: 24045

culture collection no.: DSM 29364, ATCC BAA 2694

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny26296673Description of Bartonella ancashensis sp. nov., isolated from the blood of two patients with verruga peruana.Mullins KE, Hang J, Jiang J, Leguia M, Kasper MR, Ventosilla P, Maguina C, Jarman RG, Blazes D, Richards ALInt J Syst Evol Microbiol10.1099/ijsem.0.0004162015Bacterial Typing Techniques, Bartonella/*classification/genetics/isolation & purification, Bartonella Infections/blood/*microbiology, Base Composition, Child, Child, Preschool, DNA, Bacterial/genetics, DNA, Ribosomal Spacer/genetics, Fatty Acids/chemistry, Genes, Bacterial, Genotype, Humans, Male, Molecular Sequence Data, Peru, *Phylogeny, RNA, Ribosomal, 16S/genetics, RNA, Ribosomal, 23S/genetics, Sequence Analysis, DNAGenetics
Genetics26543106Complete Genome Sequence of Bartonella ancashensis Strain 20.00, Isolated from the Blood of a Patient with Verruga Peruana.Hang J, Mullins KE, Clifford RJ, Onmus-Leone F, Yang Y, Jiang J, Leguia M, Kasper MR, Maguina C, Lesho EP, Jarman RG, Richards AL, Blazes DGenome Announc10.1128/genomeA.01217-152015Phylogeny

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24045Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-29364Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29364)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes