Strain identifier

BacDive ID: 132219

Type strain: Yes

Species: Enterobacillus tribolii

Strain Designation: IG-V01

Strain history: <- Venkata Ramana, MCC, NCCS, India.

NCBI tax ID(s): 1487935 (species)

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General

@ref: 24008

BacDive-ID: 132219

DSM-Number: 103736

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, motile

description: Enterobacillus tribolii IG-V01 is an aerobe, mesophilic, motile bacterium that was isolated from gut of red flour beetle .

NCBI tax id

  • NCBI tax id: 1487935
  • Matching level: species

strain history

@refhistory
24008<- KCTC <- R. C. Salunkhe, Bombay Natural History Society, Mumbai, India and V.S. Patil, Microbial Culture Collection, National Centre for Cell Science, Pune, Maharastra, India
67771<- Venkata Ramana, MCC, NCCS, India.

doi: 10.13145/bacdive132219.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Enterobacteriaceae
  • genus: Enterobacillus
  • species: Enterobacillus tribolii
  • full scientific name: Enterobacillus tribolii Patil et al. 2015

@ref: 24008

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacterales

family: Enterobacteriaceae

genus: Enterobacillus

species: Enterobacillus tribolii

full scientific name: Enterobacillus tribolii Patil et al. 2015

strain designation: IG-V01

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes97.769
6948099.977negative

Culture and growth conditions

culture temp

  • @ref: 67771
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 67771
  • oxygen tolerance: aerobe

spore formation

@refspore formationconfidence
69481no100
69480no98.804

Isolation, sampling and environmental information

isolation

@refsample typehost speciescountryorigin.countrycontinent
24008gut of red flour beetle (Tribolium castaneum)Tribolium castaneumIndiaINDAsia
67771From insect gutIndiaINDAsia

isolation source categories

Cat1Cat2Cat3
#Host#Arthropoda#Insecta
#Host Body-Site#Gastrointestinal tract#Stomach

Sequence information

16S sequences

  • @ref: 24008
  • description: Enterobacillus tribolii partial 16S rRNA gene, type strain IG-V01T
  • accession: HG972968
  • length: 1404
  • database: ena
  • NCBI tax ID: 1487935

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Enterobacillus tribolii DSM 103736GCA_003363015scaffoldncbi1487935
66792Enterobacillus tribolii IG-V01GCA_019739135contigncbi1487935
66792Enterobacillus tribolii strain DSM 1037361487935.3wgspatric1487935
66792Enterobacillus tribolii strain IG-V011487935.4wgspatric1487935
66792Enterobacillus tribolii DSM 1037362756170277draftimg1487935

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileyes92.425no
flagellatedno50no
gram-positiveno98.319no
anaerobicno96.597no
aerobicyes76.265no
halophileno85.964no
spore-formingno95.312no
glucose-utilyes93.657no
thermophileno98.71no
glucose-fermentyes92.844no

External links

@ref: 24008

culture collection no.: DSM 103736, KCTC 42159, MCC 2532

literature

  • topic: Phylogeny
  • Pubmed-ID: 25716888
  • title: Enterobacillus tribolii gen. nov., sp. nov., a novel member of the family Enterobacteriaceae, isolated from the gut of a red flour beetle, Tribolium castaneum.
  • authors: Patil VS, Salunkhe RC, Patil RH, Husseneder C, Shouche YS, Venkata Ramana V
  • journal: Antonie Van Leeuwenhoek
  • DOI: 10.1007/s10482-015-0412-8
  • year: 2015
  • mesh: Animals, Bacterial Typing Techniques, Base Composition, Enterobacteriaceae/*classification/genetics/*isolation & purification/physiology, Fatty Acids/chemistry/metabolism, Gastrointestinal Tract/microbiology, Molecular Sequence Data, Phylogeny, Tribolium/*microbiology
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24008Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-103736Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 103736)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
67771Curators of the KCTChttps://kctc.kribb.re.kr/En/Kctc
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. MünchPredictions based on the model GenomeNet Sporulation v. 110.21203/rs.3.rs-2527258/v1