Strain identifier

BacDive ID: 132217

Type strain: Yes

Species: Marivita roseacus

Strain history: <- C. Budinoff, Dept. Microbiology, Univ. Tennessee, Knoxville, USA; CB 1052

NCBI tax ID(s): 692487 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 24006

BacDive-ID: 132217

DSM-Number: 23118

keywords: 16S sequence, Bacteria, mesophilic

description: Marivita roseacus DSM 23118 is a mesophilic bacterium that was isolated from seawater from a temperate estuary.

NCBI tax id

  • NCBI tax id: 692487
  • Matching level: species

strain history

  • @ref: 24006
  • history: <- C. Budinoff, Dept. Microbiology, Univ. Tennessee, Knoxville, USA; CB 1052

doi: 10.13145/bacdive132217.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodobacterales
  • family: Roseobacteraceae
  • genus: Marivita
  • species: Marivita roseacus
  • full scientific name: Marivita roseacus Budinoff et al. 2011

@ref: 24006

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodobacterales

family: Rhodobacteraceae

genus: Marivita

species: Marivita roseacus

full scientific name: Marivita roseacus Budinoff et al. 2011

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 24006
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 24006
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 24006
  • sample type: seawater from a temperate estuary
  • geographic location: lower Chesapeake Bay, Station 724 (37°16' N 76°09'W)
  • country: USA
  • origin.country: USA
  • continent: North America
  • latitude: 37.2667
  • longitude: -75.15

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Estuary
#Environmental#Aquatic#Marine

taxonmaps

  • @ref: 69479
  • File name: preview.99_30552.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_3019;97_3708;98_22734;99_30552&stattab=map
  • Last taxonomy: Marivita roseacus subclade
  • 16S sequence: GU137308
  • Sequence Identity:
  • Total samples: 859
  • soil counts: 4
  • aquatic counts: 817
  • animal counts: 34
  • plant counts: 4

Sequence information

16S sequences

  • @ref: 24006
  • description: Marivita roseacus strain CB1052 16S ribosomal RNA gene, partial sequence
  • accession: GU137308
  • length: 1454
  • database: ena
  • NCBI tax ID: 692487

GC content

  • @ref: 24006
  • GC-content: 59.6
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 24006

culture collection no.: DSM 23118, ATCC BAA 1914, CB 1052

literature

  • topic: Phylogeny
  • Pubmed-ID: 22139454
  • title: Marivita roseacus sp. nov., of the family Rhodobacteraceae, isolated from a temperate estuary and an emended description of the genus Marivita.
  • authors: Budinoff CR, Dunlap JR, Hadden M, Buchan A
  • journal: J Gen Appl Microbiol
  • DOI: 10.2323/jgam.57.259
  • year: 2011
  • mesh: Bacterial Proteins/genetics, Bacterial Typing Techniques, Bacteriochlorophyll A/biosynthesis/genetics, Base Sequence, Bays/*microbiology, DNA, Bacterial/analysis/genetics, DNA, Ribosomal/analysis/genetics, Microbial Sensitivity Tests, Molecular Sequence Data, Photosynthetic Reaction Center Complex Proteins/genetics, Phylogeny, RNA, Ribosomal, 16S/*genetics, Rhodobacteraceae/*classification/cytology/*isolation & purification/physiology, Seawater/*microbiology, Sequence Analysis, DNA, Sulfonium Compounds/metabolism
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
24006Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-23118Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23118)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/