Strain identifier
BacDive ID: 132217
Type strain:
Species: Marivita roseacus
Strain history: <- C. Budinoff, Dept. Microbiology, Univ. Tennessee, Knoxville, USA; CB 1052
NCBI tax ID(s): 692487 (species)
General
@ref: 24006
BacDive-ID: 132217
DSM-Number: 23118
keywords: 16S sequence, Bacteria, mesophilic
description: Marivita roseacus DSM 23118 is a mesophilic bacterium that was isolated from seawater from a temperate estuary.
NCBI tax id
- NCBI tax id: 692487
- Matching level: species
strain history
- @ref: 24006
- history: <- C. Budinoff, Dept. Microbiology, Univ. Tennessee, Knoxville, USA; CB 1052
doi: 10.13145/bacdive132217.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodobacterales
- family: Roseobacteraceae
- genus: Marivita
- species: Marivita roseacus
- full scientific name: Marivita roseacus Budinoff et al. 2011
@ref: 24006
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodobacterales
family: Rhodobacteraceae
genus: Marivita
species: Marivita roseacus
full scientific name: Marivita roseacus Budinoff et al. 2011
type strain: yes
Culture and growth conditions
culture medium
- @ref: 24006
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 24006
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 24006
- sample type: seawater from a temperate estuary
- geographic location: lower Chesapeake Bay, Station 724 (37°16' N 76°09'W)
- country: USA
- origin.country: USA
- continent: North America
- latitude: 37.2667
- longitude: -75.15
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Aquatic | #Estuary |
#Environmental | #Aquatic | #Marine |
taxonmaps
- @ref: 69479
- File name: preview.99_30552.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_3019;97_3708;98_22734;99_30552&stattab=map
- Last taxonomy: Marivita roseacus subclade
- 16S sequence: GU137308
- Sequence Identity:
- Total samples: 859
- soil counts: 4
- aquatic counts: 817
- animal counts: 34
- plant counts: 4
Sequence information
16S sequences
- @ref: 24006
- description: Marivita roseacus strain CB1052 16S ribosomal RNA gene, partial sequence
- accession: GU137308
- length: 1454
- database: ena
- NCBI tax ID: 692487
GC content
- @ref: 24006
- GC-content: 59.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 24006
culture collection no.: DSM 23118, ATCC BAA 1914, CB 1052
literature
- topic: Phylogeny
- Pubmed-ID: 22139454
- title: Marivita roseacus sp. nov., of the family Rhodobacteraceae, isolated from a temperate estuary and an emended description of the genus Marivita.
- authors: Budinoff CR, Dunlap JR, Hadden M, Buchan A
- journal: J Gen Appl Microbiol
- DOI: 10.2323/jgam.57.259
- year: 2011
- mesh: Bacterial Proteins/genetics, Bacterial Typing Techniques, Bacteriochlorophyll A/biosynthesis/genetics, Base Sequence, Bays/*microbiology, DNA, Bacterial/analysis/genetics, DNA, Ribosomal/analysis/genetics, Microbial Sensitivity Tests, Molecular Sequence Data, Photosynthetic Reaction Center Complex Proteins/genetics, Phylogeny, RNA, Ribosomal, 16S/*genetics, Rhodobacteraceae/*classification/cytology/*isolation & purification/physiology, Seawater/*microbiology, Sequence Analysis, DNA, Sulfonium Compounds/metabolism
- topic2: Genetics
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
24006 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23118 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23118) | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |