Strain identifier
BacDive ID: 132204
Type strain: 
Species: Oenococcus alcoholitolerans
Strain Designation: UFRJ-M7.2.18
Strain history: <- BCCM/LMG, University of Gent, Belgium; LMG 27599 <- F. Thompson, Federal University of Rio de Janeiro (UFRJ), Brazil <- A.P.B. Moreira <- B.L. de Lucena
NCBI tax ID(s): 931074 (species)
version 8.1 (current version)
General
@ref: 23993
BacDive-ID: 132204
DSM-Number: 103240
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Oenococcus alcoholitolerans UFRJ-M7.2.18 is a mesophilic bacterium that was isolated from ethanol production plant.
NCBI tax id
- NCBI tax id: 931074
- Matching level: species
strain history
- @ref: 23993
- history: <- BCCM/LMG, University of Gent, Belgium; LMG 27599 <- F. Thompson, Federal University of Rio de Janeiro (UFRJ), Brazil <- A.P.B. Moreira <- B.L. de Lucena
doi: 10.13145/bacdive132204.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Oenococcus
- species: Oenococcus alcoholitolerans
- full scientific name: Oenococcus alcoholitolerans Badotti et al. 2015
@ref: 23993
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Leuconostocaceae
genus: Oenococcus
species: Oenococcus alcoholitolerans
full scientific name: Oenococcus alcoholitolerans Badotti et al. 2015
strain designation: UFRJ-M7.2.18
type strain: yes
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 94.546 | |
| 69480 | 99.72 | positive |
Culture and growth conditions
culture medium
- @ref: 23993
- name: MRS MEDIUM WITH CYSTEINE (DSMZ Medium 232)
- growth: yes
- link: https://mediadive.dsmz.de/medium/232
- composition: Name: MRS MEDIUM WITH CYSTEINE (DSMZ Medium 232) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)2 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
culture temp
- @ref: 23993
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69481 | no | 97 |
| 69480 | no | 100 |
Isolation, sampling and environmental information
isolation
- @ref: 23993
- sample type: ethanol production plant
- geographic location: Paraiba State
- country: Brazil
- origin.country: BRA
- continent: Middle and South America
isolation source categories
- Cat1: #Engineered
- Cat2: #Industrial
- Cat3: #Plant (Factory)
Safety information
risk assessment
- @ref: 23993
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 23993
- description: Oenococcus alcoholitolerans strain UFRJ-M7.2.18 16S ribosomal RNA gene, partial sequence
- accession: HQ009794
- length: 1506
- database: ena
- NCBI tax ID: 931074
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Oenococcus alcoholitolerans UFRJ-M7.2.18 | GCA_000769695 | contig | ncbi | 931074 |
| 66792 | Oenococcus alcoholitolerans UFRJ-M7.2.18 | 931074.3 | wgs | patric | 931074 |
| 66792 | Oenococcus alcoholitolerans UFRJ-M7.2.18 | 2636415795 | draft | img | 931074 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 97 | no |
| motile | no | 95.524 | no |
| flagellated | no | 98.432 | no |
| gram-positive | yes | 88.253 | no |
| anaerobic | yes | 50.875 | no |
| halophile | yes | 61.461 | no |
| spore-forming | no | 98.427 | no |
| glucose-util | yes | 90.121 | no |
| aerobic | no | 97.482 | no |
| thermophile | no | 99.457 | no |
| glucose-ferment | yes | 88.74 | no |
External links
@ref: 23993
culture collection no.: DSM 103240, CBAS 474, LMG 27599
straininfo link
- @ref: 90557
- straininfo: 388573
literature
- topic: Phylogeny
- Pubmed-ID: 25315101
- title: Oenococcus alcoholitolerans sp. nov., a lactic acid bacteria isolated from cachaca and ethanol fermentation processes.
- authors: Badotti F, Moreira AP, Tonon LA, de Lucena BT, Gomes Fde C, Kruger R, Thompson CC, de Morais MA Jr, Rosa CA, Thompson FL
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-014-0296-z
- year: 2014
- mesh: Bacterial Typing Techniques, Brazil, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Ethanol/*metabolism, Fermentation, *Food Microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Oenococcus/*classification/*isolation & purification, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Biotechnology
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 23993 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-103240 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 103240) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 90557 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID388573.1 |