Strain identifier

BacDive ID: 132104

Type strain: No

Species: Ruminococcus sp.

Strain Designation: Sanger_36

Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; Sanger_36

NCBI tax ID(s): 2764184 (species)

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General

@ref: 23894

BacDive-ID: 132104

DSM-Number: 102803

keywords: Bacteria, mesophilic

description: Ruminococcus sp. Sanger_36 is a mesophilic bacterium that was isolated from faeces from healthy human.

NCBI tax id

  • NCBI tax id: 2764184
  • Matching level: species

strain history

  • @ref: 23894
  • history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; Sanger_36

doi: 10.13145/bacdive132104.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Oscillospiraceae
  • genus: Ruminococcus
  • species: Ruminococcus sp.
  • full scientific name: Ruminococcus Sijpesteijn 1948 (Approved Lists 1980)

@ref: 23894

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Oscillospiraceae

genus: Ruminococcus

species: Ruminococcus sp.

full scientific name: Ruminococcus sp.

strain designation: Sanger_36

type strain: no

Culture and growth conditions

culture medium

  • @ref: 23894
  • name: YCFA-MEDIUM (MODIFIED) (DSMZ Medium 1611)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1611
  • composition: Name: YCFA MEDIUM (modified) (DSMZ Medium 1611) Composition: Casitone 10.0 g/l Glucose 5.0 g/l NaHCO3 4.0 g/l Yeast extract 2.5 g/l Acetic acid 1.78695 g/l L-Cysteine HCl 1.0 g/l NaCl 0.9 g/l Propionic acid 0.62559 g/l KH2PO4 0.45 g/l K2HPO4 0.45 g/l CaCl2 x 2 H2O 0.09 g/l n-Valeric acid 0.08451 g/l iso-Valeric acid 0.0837899 g/l iso-Butyric acid 0.07695 g/l MgSO4 x 7 H2O 0.045 g/l Hemin 0.01 g/l Resazurin 0.001 g/l Pyridoxine hydrochloride 0.0001 g/l Nicotinic acid 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l Riboflavin 5e-05 g/l D-Calcium pantothenate 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Lipoic acid 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Vitamin B12 1e-06 g/l Distilled water

culture temp

  • @ref: 23894
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 23894
  • sample type: faeces from healthy human
  • geographic location: Cambridgeshire
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Gastrointestinal tract#Feces (Stool)

External links

@ref: 23894

culture collection no.: DSM 102803

straininfo link

  • @ref: 90460
  • straininfo: 404522

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
23894Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-102803Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102803)
90460Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID404522.1