Strain identifier
BacDive ID: 1321
Type strain: 
Species: Robertmurraya beringensis
Strain history: <- Y. U. Yong, Polar Res. Institute of China, Shanghai, PR China; BR035
NCBI tax ID(s): 641660 (species)
version 8.1 (current version)
General
@ref: 16403
BacDive-ID: 1321
DSM-Number: 22571
keywords: 16S sequence, Bacteria, mesophilic
description: Robertmurraya beringensis DSM 22571 is a mesophilic bacterium that was isolated from seawater at 10 m depth.
NCBI tax id
- NCBI tax id: 641660
- Matching level: species
strain history
- @ref: 16403
- history: <- Y. U. Yong, Polar Res. Institute of China, Shanghai, PR China; BR035
doi: 10.13145/bacdive1321.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Robertmurraya
- species: Robertmurraya beringensis
- full scientific name: Robertmurraya beringensis (Yu et al. 2012) Gupta et al. 2020
synonyms
- @ref: 20215
- synonym: Bacillus beringensis
@ref: 16403
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Robertmurraya
species: Robertmurraya beringensis
full scientific name: Robertmurraya beringensis (Yu et al. 2012) Gupta et al. 2020
type strain: yes
Culture and growth conditions
culture medium
- @ref: 16403
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 16403
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 16403
- sample type: seawater at 10 m depth
- geographic location: Bering Sea (54°59'50'' N 171°49'25'' E)
- continent: Australia and Oceania
- latitude: 54.9972
- longitude: 172
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_39042.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_264;97_3400;98_4288;99_39042&stattab=map
- Last taxonomy: Bacillus beringensis
- 16S sequence: FJ889576
- Sequence Identity:
- Total samples: 407
- soil counts: 165
- aquatic counts: 64
- animal counts: 171
- plant counts: 7
Safety information
risk assessment
- @ref: 16403
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 16403
- description: Bacillus beringensis strain BR035 16S ribosomal RNA gene, partial sequence
- accession: FJ889576
- length: 1516
- database: ena
- NCBI tax ID: 641660
GC content
- @ref: 16403
- GC-content: 37.8
- method: high performance liquid chromatography (HPLC)
External links
@ref: 16403
culture collection no.: DSM 22571, CGMCC 1.9126, BR 035
straininfo link
- @ref: 70970
- straininfo: 400537
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 20963491 | Bacillus beringensis sp. nov., a psychrotolerant bacterium isolated from the Bering Sea. | Yu Y, Li HR, Zeng YX, Chen B | Antonie Van Leeuwenhoek | 10.1007/s10482-010-9523-4 | 2010 | Bacillus/classification/*genetics/*isolation & purification, Molecular Sequence Data, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology | Genetics |
| Phylogeny | 26115993 | Bacillus coreaensis sp. nov.: a xylan-hydrolyzing bacterium isolated from the soil of Jeju Island, Republic of Korea. | Chi WJ, Youn YS, Park JS, Hong SK | J Microbiol | 10.1007/s12275-015-5140-2 | 2015 | Bacillus/classification/*isolation & purification/*metabolism/physiology, Base Composition, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Hydrolysis, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/analysis, Xylans/*metabolism | Metabolism |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 16403 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22571) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22571 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 70970 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID400537.1 | StrainInfo: A central database for resolving microbial strain identifiers |