Strain identifier

BacDive ID: 132084

Type strain: No

Species: Carboxydocella ferrireducans

Strain Designation: 019

Strain history: <- T. G. Sokolova, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; 019 <- T. G. Sokolova {2004}

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General

@ref: 23874

BacDive-ID: 132084

DSM-Number: 19011

keywords: 16S sequence, thermophilic

description: Carboxydocella ferrireducans 019 is a thermophilic bacterium that was isolated from thermal spring.

strain history

  • @ref: 23874
  • history: <- T. G. Sokolova, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; 019 <- T. G. Sokolova {2004}

doi: 10.13145/bacdive132084.20230509.8.1

Name and taxonomic classification

@ref: 23874

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Clostridia, not assigned to family

genus: Carboxydocella

species: Carboxydocella ferrireducans

full scientific name: Carboxydocella ferrireducans

strain designation: 019

type strain: no

Culture and growth conditions

culture medium

  • @ref: 23874
  • name: CARBOXYDOTHERMUS MEDIUM (DSMZ Medium 507)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/507
  • composition: Name: CARBOXYDOTHERMUS MEDIUM (DSMZ Medium 507; with strain-specific modifications) Composition: NaHCO3 0.998004 g/l Na2S x 9 H2O 0.698603 g/l MgCl2 x 6 H2O 0.518962 g/l KCl 0.329341 g/l NH4Cl 0.329341 g/l KH2PO4 0.329341 g/l CaCl2 x 2 H2O 0.289421 g/l Na-lactate 0.199601 g/l Yeast extract 0.0499002 g/l Na2-EDTA x 2 H2O 0.00518962 g/l FeCl2 x 4 H2O 0.00149701 g/l Sodium resazurin 0.000499002 g/l CoCl2 x 6 H2O 0.000189621 g/l Pyridoxine hydrochloride 9.98004e-05 g/l MnCl2 x 4 H2O 9.98004e-05 g/l ZnCl2 6.98603e-05 g/l Nicotinic acid 4.99002e-05 g/l Calcium D-(+)-pantothenate 4.99002e-05 g/l Thiamine HCl 4.99002e-05 g/l p-Aminobenzoic acid 4.99002e-05 g/l (DL)-alpha-Lipoic acid 4.99002e-05 g/l Riboflavin 4.99002e-05 g/l Na2MoO4 x 2 H2O 3.59281e-05 g/l NiCl2 x 6 H2O 2.39521e-05 g/l Biotin 1.99601e-05 g/l Folic acid 1.99601e-05 g/l H3BO3 5.98802e-06 g/l CuCl2 x 2 H2O 1.99601e-06 g/l Vitamin B12 9.98004e-07 g/l Distilled water

culture temp

  • @ref: 23874
  • growth: positive
  • type: growth
  • temperature: 60
  • range: thermophilic

Isolation, sampling and environmental information

isolation

  • @ref: 23874
  • sample type: thermal spring
  • geographic location: Kamchatka Peninsula
  • country: Russia
  • origin.country: RUS
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Thermophilic (>45°C)

taxonmaps

  • @ref: 69479
  • File name: preview.99_7928.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15882;96_3671;97_4508;98_5787;99_7928&stattab=map
  • Last taxonomy: Carboxydocella sporoproducens subclade
  • 16S sequence: EF092457
  • Sequence Identity:
  • Total samples: 426
  • soil counts: 31
  • aquatic counts: 90
  • animal counts: 248
  • plant counts: 57

Sequence information

16S sequences

  • @ref: 23874
  • description: Carboxydocella ferrireducens strain 019 16S ribosomal RNA gene, partial sequence
  • accession: EF092457
  • length: 1474
  • database: ena
  • NCBI tax ID: 412901

GC content

  • @ref: 23874
  • GC-content: 48.0

External links

@ref: 23874

culture collection no.: DSM 19011

Reference

@idauthorscataloguedoi/urltitle
23874Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19011)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19011
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta