Strain identifier
BacDive ID: 132054
Type strain: 
Species: Nitrosomonas eutropha
Strain Designation: C-91, Nm57
Strain history: <- A. Pommerening-Röser, Universität Hamburg, Department of Microbiology and Biotechnology; Nm57 <- S. W. Watson, Woods Hole Oceanographic Institute, Massachuetts, USA; C-91
NCBI tax ID(s): 916 (species)
version 8.1 (current version)
General
@ref: 23845
BacDive-ID: 132054
DSM-Number: 101675
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Nitrosomonas eutropha C-91 is a mesophilic bacterium that was isolated from sewage.
NCBI tax id
- NCBI tax id: 916
- Matching level: species
strain history
- @ref: 23845
- history: <- A. Pommerening-Röser, Universität Hamburg, Department of Microbiology and Biotechnology; Nm57 <- S. W. Watson, Woods Hole Oceanographic Institute, Massachuetts, USA; C-91
doi: 10.13145/bacdive132054.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Nitrosomonadales
- family: Nitrosomonadaceae
- genus: Nitrosomonas
- species: Nitrosomonas eutropha
- full scientific name: Nitrosomonas eutropha Koops et al. 1991
@ref: 23845
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Nitrosomonadales
family: Nitrosomonadaceae
genus: Nitrosomonas
species: Nitrosomonas eutropha
full scientific name: Nitrosomonas eutropha Koops et al. 2001
strain designation: C-91, Nm57
type strain: yes
Culture and growth conditions
culture medium
- @ref: 23845
- name: MEDIUM FOR AMMONIA OXIDIZING BACTERIA (STRAINS FROM SOIL) (DSMZ Medium 1583)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1583
- composition: Name: MEDIUM FOR AMMONIA OXIDIZING BACTERIA (STRAINS FROM SOIL) (DSMZ Medium 1583) Composition: NaCl 0.584 g/l NH4Cl 0.535 g/l CaCl2 x 2 H2O 0.147 g/l KCl 0.074 g/l KH2PO4 0.054 g/l MgSO4 x 7 H2O 0.049 g/l Cresol red 0.001 g/l FeSO4 x 7 H2O 0.000973 g/l H3BO3 4.9e-05 g/l MnSO4 x 4 H2O 4.5e-05 g/l ZnSO4 x 7 H2O 4.3e-05 g/l (NH4)6Mo7O24 x 4 H2O 3.7e-05 g/l CuSO4 x 5 H2O 2.5e-05 g/l HCl Distilled water
culture temp
- @ref: 23845
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 23845
- sample type: sewage
- geographic location: Chicago
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
- Cat1: #Engineered
- Cat2: #Waste
- Cat3: #Wastewater
taxonmaps
- @ref: 69479
- File name: preview.99_3519.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_316;96_1595;97_2199;98_2698;99_3519&stattab=map
- Last taxonomy: Nitrosomonas eutropha subclade
- 16S sequence: AY123795
- Sequence Identity:
- Total samples: 168
- soil counts: 13
- aquatic counts: 129
- animal counts: 20
- plant counts: 6
Safety information
risk assessment
- @ref: 23845
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 23845
- description: Nitrosomonas eutropha 16S ribosomal RNA gene, partial sequence
- accession: AY123795
- length: 1498
- database: ena
- NCBI tax ID: 335283
Genome sequences
- @ref: 66792
- description: Nitrosomonas eutropha Nm57
- accession: 2737471641
- assembly level: draft
- database: img
- NCBI tax ID: 335283
External links
@ref: 23845
culture collection no.: DSM 101675
literature
| Pubmed-ID | title | authors | journal | DOI | year | topic | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| 9758771 | Effects of pH and oxygen and ammonium concentrations on the community structure of nitrifying bacteria from wastewater | Princic A, Mahne I I, Megusar F, Paul EA, Tiedje JM | Appl Environ Microbiol | 10.1128/AEM.64.10.3584-3590.1998 | 1998 | |||
| 21470297 | Effects of nitrite on ammonia-oxidizing activity and gene regulation in three ammonia-oxidizing bacteria. | Cua LS, Stein LY | FEMS Microbiol Lett | 10.1111/j.1574-6968.2011.02277.x | 2011 | Metabolism | Ammonia/*metabolism, Bacterial Proteins/genetics/metabolism, *Gene Expression Regulation, Bacterial, Molecular Sequence Data, Nitrites/*metabolism, Nitrosomonas/genetics/*metabolism, Oxidation-Reduction | Genetics |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 23845 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-101675 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 101675) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |