Strain identifier
BacDive ID: 131740
Type strain:
Species: Listeria monocytogenes
Strain Designation: Li 20
Strain history: CIP <- 1996, J. Rocourt, Inst. Pasteur, Paris, France: strain CLIP 74902 <- E. Bannerman <- H. Seeliger
NCBI tax ID(s): 1639 (species)
General
@ref: 23536
BacDive-ID: 131740
DSM-Number: 102976
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-positive
description: Listeria monocytogenes Li 20 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from Guinea pig mesenteric lymph node.
NCBI tax id
- NCBI tax id: 1639
- Matching level: species
strain history
@ref | history |
---|---|
23536 | <- CCM; CCM 5576 <- H. P. R. Seeliger; Li 20 <- J. S. Paterson |
35019 | 1978, H. Seeliger, Würzburg, Germany: strain SLCC 2375 |
67770 | CCM 5576 <-- H. P. R. Seeliger Li 20 <-- J. S. Paterson LS/2. |
121128 | CIP <- 1996, J. Rocourt, Inst. Pasteur, Paris, France: strain CLIP 74902 <- E. Bannerman <- H. Seeliger |
doi: 10.13145/bacdive131740.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Listeriaceae
- genus: Listeria
- species: Listeria monocytogenes
- full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium monocytogenes
@ref: 23536
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Listeriaceae
genus: Listeria
species: Listeria monocytogenes
full scientific name: Listeria monocytogenes (Murray et al. 1926) Pirie 1940
strain designation: Li 20
type strain: no
Morphology
cell morphology
@ref | gram stain | confidence | cell shape | motility |
---|---|---|---|---|
69480 | positive | 100 | ||
121128 | positive | rod-shaped | yes |
colony morphology
@ref | type of hemolysis | hemolysis ability |
---|---|---|
68376 | beta | 1 |
68370 | beta | 1 |
121128 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
23536 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
23536 | BHI MEDIUM (DSMZ Medium 215) | yes | https://mediadive.dsmz.de/medium/215 | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water |
35019 | MEDIUM 3 - Columbia agar | yes | Columbia agar (39.000 g);distilled water (1000.000 ml) | |
42076 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
121128 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 | |
121128 | CIP Medium 3 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
23536 | positive | growth | 37 | mesophilic |
35019 | positive | growth | 30 | mesophilic |
42076 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 37 | mesophilic |
121128 | positive | growth | 5-41 | |
121128 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 121128
- oxygen tolerance: facultative anaerobe
spore formation
- @ref: 69480
- spore formation: no
- confidence: 99.296
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | gluconate | - | builds acid from | 24265 |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | + | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | - | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | turanose | - | builds acid from | 32528 |
68371 | gentiobiose | + | builds acid from | 28066 |
68371 | xylitol | + | builds acid from | 17151 |
68371 | glycogen | - | builds acid from | 28087 |
68371 | starch | - | builds acid from | 28017 |
68371 | raffinose | - | builds acid from | 16634 |
68371 | melezitose | + | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | + | builds acid from | 27082 |
68371 | sucrose | - | builds acid from | 17992 |
68371 | melibiose | - | builds acid from | 28053 |
68371 | lactose | - | builds acid from | 17716 |
68371 | maltose | + | builds acid from | 17306 |
68371 | cellobiose | + | builds acid from | 17057 |
68371 | salicin | + | builds acid from | 17814 |
68371 | esculin | + | builds acid from | 4853 |
68371 | arbutin | + | builds acid from | 18305 |
68371 | amygdalin | + | builds acid from | 27613 |
68371 | N-acetylglucosamine | + | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | + | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | + | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | - | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | + | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | + | builds acid from | 16024 |
68371 | D-fructose | + | builds acid from | 15824 |
68371 | D-glucose | + | builds acid from | 17634 |
68371 | D-galactose | - | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | - | builds acid from | 65327 |
68371 | D-ribose | - | builds acid from | 16988 |
68371 | L-arabinose | - | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | - | builds acid from | 17754 |
68370 | glycogen | - | builds acid from | 28087 |
68370 | starch | - | builds acid from | 28017 |
68370 | raffinose | - | builds acid from | 16634 |
68370 | inulin | - | builds acid from | 15443 |
68370 | trehalose | + | builds acid from | 27082 |
68370 | lactose | - | builds acid from | 17716 |
68370 | D-sorbitol | - | builds acid from | 17924 |
68370 | D-mannitol | - | builds acid from | 16899 |
68370 | L-arabinose | - | builds acid from | 30849 |
68370 | D-ribose | - | builds acid from | 16988 |
68370 | arginine | - | hydrolysis | 29016 |
68370 | esculin | + | hydrolysis | 4853 |
68370 | hippurate | + | hydrolysis | 606565 |
121128 | esculin | + | hydrolysis | 4853 |
121128 | nitrate | - | reduction | 17632 |
121128 | nitrite | - | reduction | 16301 |
121128 | nitrate | + | respiration | 17632 |
68379 | nitrate | - | reduction | 17632 |
68379 | esculin | + | hydrolysis | 4853 |
68379 | urea | - | hydrolysis | 16199 |
68379 | gelatin | - | hydrolysis | 5291 |
68379 | D-glucose | + | fermentation | 17634 |
68379 | D-ribose | - | fermentation | 16988 |
68379 | D-xylose | - | fermentation | 65327 |
68379 | D-mannitol | - | fermentation | 16899 |
68379 | maltose | + | fermentation | 17306 |
68379 | lactose | + | fermentation | 17716 |
68379 | glycogen | - | fermentation | 28087 |
68376 | esculin | + | hydrolysis | 4853 |
68376 | D-arabitol | + | builds acid from | 18333 |
68376 | L-rhamnose | + | builds acid from | 62345 |
68376 | methyl alpha-D-glucopyranoside | + | builds acid from | 320061 |
68376 | D-ribose | - | builds acid from | 16988 |
68376 | D-tagatose | - | builds acid from | 16443 |
68380 | urea | - | hydrolysis | 16199 |
68380 | arginine | - | hydrolysis | 29016 |
68380 | D-mannose | + | fermentation | 16024 |
68380 | raffinose | - | fermentation | 16634 |
68380 | L-glutamate | - | degradation | 29985 |
68380 | nitrate | - | reduction | 17632 |
68380 | tryptophan | - | energy source | 27897 |
68381 | arginine | - | hydrolysis | 29016 |
68381 | D-ribose | - | builds acid from | 16988 |
68381 | D-mannitol | - | builds acid from | 16899 |
68381 | sorbitol | - | builds acid from | 30911 |
68381 | lactose | + | builds acid from | 17716 |
68381 | trehalose | + | builds acid from | 27082 |
68381 | raffinose | - | builds acid from | 16634 |
68381 | sucrose | - | builds acid from | 17992 |
68381 | L-arabinose | - | builds acid from | 30849 |
68381 | D-arabitol | + | builds acid from | 18333 |
68381 | alpha-cyclodextrin | + | builds acid from | 40585 |
68381 | hippurate | + | hydrolysis | 606565 |
68381 | glycogen | - | builds acid from | 28087 |
68381 | pullulan | - | builds acid from | 27941 |
68381 | maltose | + | builds acid from | 17306 |
68381 | melibiose | - | builds acid from | 28053 |
68381 | melezitose | - | builds acid from | 6731 |
68381 | methyl beta-D-glucopyranoside | + | builds acid from | 320055 |
68381 | D-tagatose | - | builds acid from | 16443 |
68381 | urea | - | hydrolysis | 16199 |
antibiotic resistance
- @ref: 121128
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: yes
- is resistant: no
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68370 | 15688 | acetoin | yes |
121128 | 35581 | indole | no |
68380 | 35581 | indole | no |
68381 | 15688 | acetoin | yes |
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | indole test | methylred-test |
---|---|---|---|---|---|
68381 | 15688 | acetoin | + | ||
68380 | 35581 | indole | - | ||
68370 | 15688 | acetoin | + | ||
121128 | 15688 | acetoin | + | ||
121128 | 17234 | glucose | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68381 | urease | - | 3.5.1.5 |
68381 | beta-mannosidase | + | 3.2.1.25 |
68381 | glycyl tryptophan arylamidase | + | |
68381 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68381 | beta-galactosidase | - | 3.2.1.23 |
68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | |
68381 | alkaline phosphatase | + | 3.1.3.1 |
68381 | alpha-galactosidase | - | 3.2.1.22 |
68381 | beta-glucuronidase | - | 3.2.1.31 |
68381 | beta-glucosidase | + | 3.2.1.21 |
68381 | arginine dihydrolase | - | 3.5.3.6 |
68380 | serine arylamidase | + | |
68380 | glutamyl-glutamate arylamidase | - | |
68380 | histidine arylamidase | + | |
68380 | glycin arylamidase | - | |
68380 | alanine arylamidase | + | 3.4.11.2 |
68380 | tyrosine arylamidase | + | |
68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68380 | leucine arylamidase | + | 3.4.11.1 |
68380 | phenylalanine arylamidase | + | |
68380 | leucyl glycin arylamidase | - | 3.4.11.1 |
68380 | proline-arylamidase | - | 3.4.11.5 |
68380 | L-arginine arylamidase | + | |
68380 | alkaline phosphatase | - | 3.1.3.1 |
68380 | tryptophan deaminase | - | 4.1.99.1 |
68380 | alpha-fucosidase | - | 3.2.1.51 |
68380 | glutamate decarboxylase | - | 4.1.1.15 |
68380 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68380 | beta-glucuronidase | - | 3.2.1.31 |
68380 | alpha-arabinosidase | - | 3.2.1.55 |
68380 | beta-glucosidase | + | 3.2.1.21 |
68380 | alpha-glucosidase | + | 3.2.1.20 |
68380 | beta-Galactosidase 6-phosphate | + | |
68380 | beta-galactosidase | - | 3.2.1.23 |
68380 | alpha-galactosidase | - | 3.2.1.22 |
68380 | arginine dihydrolase | - | 3.5.3.6 |
68380 | urease | - | 3.5.1.5 |
68376 | alpha-mannosidase | + | 3.2.1.24 |
68376 | beta-glucosidase | + | 3.2.1.21 |
68379 | catalase | + | 1.11.1.6 |
68379 | gelatinase | - | |
68379 | urease | - | 3.5.1.5 |
68379 | beta-glucosidase | + | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68379 | alpha-glucosidase | + | 3.2.1.20 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68379 | pyrazinamidase | + | 3.5.1.B15 |
68370 | arginine dihydrolase | - | 3.5.3.6 |
68370 | leucine arylamidase | + | 3.4.11.1 |
68370 | alkaline phosphatase | - | 3.1.3.1 |
68370 | beta-galactosidase | - | 3.2.1.23 |
68370 | beta-glucuronidase | - | 3.2.1.31 |
68370 | alpha-galactosidase | - | 3.2.1.22 |
68370 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68370 | beta-glucosidase | + | 3.2.1.21 |
121128 | oxidase | - | |
121128 | alcohol dehydrogenase | - | 1.1.1.1 |
121128 | catalase | + | 1.11.1.6 |
121128 | lysine decarboxylase | - | 4.1.1.18 |
121128 | ornithine decarboxylase | - | 4.1.1.17 |
121128 | urease | - | 3.5.1.5 |
68382 | alkaline phosphatase | - | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | - | |
68382 | lipase (C 14) | - | |
68382 | valine arylamidase | - | |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 65601 C16:0 2.3 16 65601 C14:0 ISO 1.4 13.618 65601 C15:0 ANTEISO 54.4 14.711 65601 C15:0 ISO 8.3 14.621 65601 C16:0 iso 2.3 15.626 65601 C17:0 anteiso 26.4 16.722 65601 C17:0 iso 1.6 16.629 65601 C18:2 ω6,9c/C18:0 ANTE 3.4 17.724 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT | GLU |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65601 | - | + | - | + | - | + | + | + | + | - | - | - | - | - | - | + | + | + | - | + | |
65601 | - | + | - | + | - | - | + | + | + | - | - | - | - | - | - | + | + | - | - | + | + |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65601 | - | - | + | - | - | + | - | - | - | + | + | + | - | - | - | + | + | + | - | - |
121128 | - | - | + | - | - | - | - | - | - | - | + | + | - | - | - | + | + | - | - | - |
API 20STR
@ref | VP | HIP | ESC | PYRA | alpha GAL | beta GUR | beta GAL | PAL | LAP | ADH | RIB | ARA | MAN | SOR | LAC | TRE | INU | RAF | AMD | GLYG | beta HEM |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65601 | + | + | + | - | - | - | - | - | + | - | - | - | - | - | - | + | - | - | - | - | + |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65601 | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | + | - | - | - | - | + | + | + | + | + | + | + | + | + | - | - | - | + | - | + | - | - | - | + | + | - | - | - | - | - | + | - | - | - | - |
API LIST
@ref | DIM | ESC | alpha MAN | DARL | XYL | RHA | MDG | RIB | G1P | TAG | beta HEM |
---|---|---|---|---|---|---|---|---|---|---|---|
23536 | + | + | + | + | - | + | + | - | + | - | + |
23536 | - | + | + | + | - | + | + | - | + | - | + |
23536 | + | + | + | + | + | + | + | - | +/- | - | + |
23536 | - | + | + | + | +/- | + | + | - | - | - | + |
23536 | +/- | + | + | + | + | + | + | - | + | - | + |
65601 | - | + | + | + | - | + | + | - | - | - | + |
API rID32A
@ref | URE | ADH Arg | alpha GAL | beta GAL | beta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta NAG | MNE | RAF | GDC | alpha FUC | NIT | IND | PAL | ArgA | ProA | LGA | PheA | LeuA | PyrA | TyrA | AlaA | GlyA | HisA | GGA | SerA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65601 | - | - | - | - | + | + | + | - | - | + | + | - | - | - | - | - | - | + | - | - | + | + | - | + | + | - | + | - | + |
API rID32STR
@ref | ADH Arg | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | CDEX | VP | APPA | beta GAL | PyrA | beta NAG | GTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Mbeta DG | TAG | beta MAN | URE |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65601 | - | + | - | - | - | + | - | - | - | + | + | - | - | - | + | + | + | - | - | - | + | + | + | - | - | + | - | - | + | - | + | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
121128 | + | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | + | - | + | - | - | + | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | country | origin.country | continent | isolation date |
---|---|---|---|---|---|
23536 | Guinea pig mesenteric lymph node | United Kingdom | GBR | Europe | |
67770 | Guinea pig mesenteric lymph node | United Kingdom | GBR | Europe | |
121128 | Animal, Guinea pig, mesenteric lymph node | United Kingdom | GBR | Europe | 1924 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Mammals | #Rodentia (Other) |
#Host Body-Site | #Organ | #Lymph node |
taxonmaps
- @ref: 69479
- File name: preview.99_71.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_32;96_57;97_60;98_65;99_71&stattab=map
- Last taxonomy: Listeria monocytogenes
- 16S sequence: LC504044
- Sequence Identity:
- Total samples: 28471
- soil counts: 991
- aquatic counts: 1408
- animal counts: 25369
- plant counts: 703
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
23536 | 2 | Risk group (German classification) |
121128 | 2 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
23536 | Listeria monocytogenes 16S ribosomal RNA | M58822 | 1553 | ena | 1639 |
67770 | Listeria monocytogenes JCM 7671 gene for 16S ribosomal RNA, partial sequence | LC504044 | 1472 | ena | 1639 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Listeria monocytogenes NCTC7973 | GCA_900637785 | complete | ncbi | 1639 |
66792 | Listeria monocytogenes strain NCTC7973 | 1639.6115 | complete | patric | 1639 |
66792 | Listeria monocytogenes NCTC7973 | 2859609986 | complete | img | 1639 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 57 | no |
flagellated | no | 59.638 | no |
gram-positive | yes | 94.769 | no |
anaerobic | no | 91.813 | no |
aerobic | no | 88.691 | no |
halophile | no | 61.426 | no |
spore-forming | no | 60.215 | no |
thermophile | no | 99.416 | no |
glucose-util | yes | 85.37 | no |
motile | yes | 75.309 | no |
glucose-ferment | yes | 59.1 | no |
External links
@ref: 23536
culture collection no.: DSM 102976, ATCC 35152, CCM 5576, CCUG 15527, CECT 5873, LMG 13304, NCTC 7973, WDCM 00109, JCM 7671, CIP 104794, NCAIM B.01371, CLIP 74902
straininfo link
@ref | straininfo |
---|---|
90131 | 35930 |
90132 | 380837 |
literature
topic | Pubmed-ID | title | authors | journal | year | mesh | topic2 | DOI |
---|---|---|---|---|---|---|---|---|
Pathogenicity | 1335960 | Modulation of leukotriene generation by invasive bacteria. | Grone M, Scheffer J, Konig W | Immunology | 1992 | Bacterial Adhesion/physiology, Cells, Cultured, Escherichia coli/*pathogenicity, Granulocytes/microbiology, Humans, Leukotriene B4/*biosynthesis, Listeria monocytogenes/*pathogenicity, Luminescent Measurements, Neutrophils/*metabolism, Phagocytosis/physiology, Receptors, Immunologic/analysis, Receptors, Leukotriene B4, Yersinia enterocolitica/*pathogenicity | Metabolism | |
Pathogenicity | 1739988 | Protective immunity and granulomatous inflammation is mediated in vivo by T cells reactive to epitopes common to avirulent and listeriolysin-negative mutants of Listeria monocytogenes. | Brocke S, Chakraborty T, Mohasseb I, Reichert H, Lombardi O, Hahn H, Mielke M | Cell Immunol | 1992 | Animals, Antigens, Bacterial/administration & dosage, *Bacterial Toxins, Bacterial Vaccines/administration & dosage, CD4 Antigens/analysis, Female, Heat-Shock Proteins/immunology, Hemolysin Proteins, Histocompatibility Antigens Class II/analysis, Immunity, Cellular, Immunization, Immunoenzyme Techniques, Immunotherapy, Adoptive, Inflammation/immunology/microbiology, Listeria monocytogenes/genetics/*immunology/pathogenicity, Listeriosis/etiology, Liver/immunology/microbiology, Lymphocyte Activation, Mice, Mice, Inbred Strains, Mutation, T-Lymphocytes/*immunology, Vaccines, Attenuated/administration & dosage | 10.1016/0008-8749(92)90175-o | |
Metabolism | 2505787 | Amino acid requirement of six strains of Listeria monocytogenes. | Siddiqi R, Khan MA | Zentralbl Bakteriol | 1989 | Amino Acids/*metabolism, Culture Media/metabolism, Listeria monocytogenes/*metabolism, Species Specificity | Phylogeny | 10.1016/s0934-8840(89)80067-2 |
Phenotype | 2558949 | Mutations affecting hemolysin production in Listeria monocytogenes located outside the listeriolysin gene. | Leimeister-Wachter M, Goebel W, Chakraborty T | FEMS Microbiol Lett | 1989 | *Bacterial Toxins, Blotting, Southern, DNA Transposable Elements, *Gene Expression Regulation, Bacterial, *Genes, Bacterial, Heat-Shock Proteins/biosynthesis/*genetics, Hemolysin Proteins/biosynthesis/*genetics/metabolism, Listeria monocytogenes/*genetics, Mutation, Phenotype, Restriction Mapping | Biotechnology | 10.1016/0378-1097(89)90360-1 |
Cultivation | 3121669 | Listeria monocytogenes ATCC 35152 and NCTC 7973 contain a nonhemolytic, nonvirulent variant. | Pine L, Weaver RE, Carlone GM, Pienta PA, Rocourt J, Goebel W, Kathariou S, Bibb WF, Malcolm GB | J Clin Microbiol | 1987 | Animals, Culture Media, Female, Hemolysin Proteins/*biosynthesis, Hemolysis, Listeria monocytogenes/genetics/metabolism/*pathogenicity, Mice, Mice, Inbred ICR, Mutation, Phenotype, Virulence | Phenotype | 10.1128/jcm.25.11.2247-2251.1987 |
Cultivation | 6819739 | Vitamin and nitrogen base requirements for Listeria monocytogenes and haemolysin production. | Siddiqi R, Khan MA | Zentralbl Bakteriol Mikrobiol Hyg A | 1982 | 4-Aminobenzoic Acid/pharmacology, Biotin/pharmacology, Culture Media, Hemolysin Proteins/*biosynthesis, Listeria monocytogenes/*physiology, Pantothenic Acid/pharmacology, Purines/*pharmacology, Pyridoxal/pharmacology, Pyrimidines/*pharmacology, Riboflavin/pharmacology, Vitamins/*pharmacology | Biotechnology | |
Biotechnology | 7763787 | The effect of pH and temperature on haemolysin production by Listeria species. | Khan SA, Khalid SM, Siddiqui R | Lett Appl Microbiol | 1993 | Hemolysin Proteins/*biosynthesis, Hydrogen-Ion Concentration, Listeria monocytogenes/*metabolism, Temperature | Metabolism | 10.1111/j.1472-765x.1993.tb01424.x |
Cultivation | 7883647 | Comparative study of the growth of Listeria monocytogenes in defined media and demonstration of growth in continuous culture. | Jones CE, Shama G, Andrew PW, Roberts IS, Jones D | J Appl Bacteriol | 1995 | Aerobiosis, Anaerobiosis, Culture Media, Listeria monocytogenes/*growth & development | 10.1111/j.1365-2672.1995.tb01675.x | |
Pathogenicity | 7992530 | [The purification and characteristics of listeriolysin O from Listeria monocytogenes]. | Karpova LA, Belyi IuF, Tartakovskii IS, Prozorovskii SV | Zh Mikrobiol Epidemiol Immunobiol | 1994 | Animals, *Bacterial Toxins, Chemical Phenomena, Chemistry, Physical, Drug Interactions, Heat-Shock Proteins/analysis/chemistry/drug effects/*isolation & purification/pharmacology, Hemolysin Proteins/analysis/chemistry/drug effects/*isolation & purification/pharmacology, Hemolysis/drug effects, Listeria monocytogenes/*pathogenicity, Molecular Weight | Enzymology | |
Pathogenicity | 8022283 | Transcriptional regulation of prfA and PrfA-regulated virulence genes in Listeria monocytogenes. | Bohne J, Sokolovic Z, Goebel W | Mol Microbiol | 1994 | Animals, Bacterial Proteins/*genetics, *Bacterial Toxins, Base Sequence, *Gene Expression Regulation, Bacterial, Genes/genetics, Heat-Shock Proteins/biosynthesis/genetics, Hemolysin Proteins, Hemolysis, Listeria monocytogenes/genetics/*pathogenicity, Macrophages/microbiology, Membrane Proteins/biosynthesis/genetics, Metalloendopeptidases/biosynthesis/genetics, Mice, Molecular Sequence Data, Peptide Termination Factors, Phosphatidylinositol Diacylglycerol-Lyase, Phosphoric Diester Hydrolases/biosynthesis/genetics, RNA Precursors/biosynthesis, Rifampin/pharmacology, Trans-Activators/*genetics, *Transcription, Genetic/drug effects, Type C Phospholipases/biosynthesis/genetics, Virulence/genetics | Genetics | 10.1111/j.1365-2958.1994.tb00390.x |
Pathogenicity | 8316076 | Surface-associated, PrfA-regulated proteins of Listeria monocytogenes synthesized under stress conditions. | Sokolovic Z, Riedel J, Wuenscher M, Goebel W | Mol Microbiol | 1993 | Animals, Bacterial Adhesion/genetics, Bacterial Proteins/*biosynthesis/genetics, *Bacterial Toxins, Cell Line, Culture Media/pharmacology, *Gene Expression Regulation, Bacterial/drug effects, *Genes, Bacterial, Heat-Shock Proteins/biosynthesis/genetics, Hemolysin Proteins, Listeria monocytogenes/genetics/*metabolism, Mice, Peptide Termination Factors, Stress, Physiological/*metabolism, Trans-Activators/*physiology, Virulence/genetics | Metabolism | 10.1111/j.1365-2958.1993.tb01566.x |
Enzymology | 8332104 | Purification and characterization of a 58-kDa cell wall-associated protein from Listeria monocytogenes. | Belyi YF, Tartakovskii IS, Prosorovskii SV | Med Microbiol Immunol | 1993 | Animals, Antibody Specificity, Bacterial Proteins/*immunology/*isolation & purification, Biomarkers, Cell Wall, Chromatography, Gel, Cross Reactions/immunology, Electrophoresis, Polyacrylamide Gel, Enzyme-Linked Immunosorbent Assay, Immunoglobulin G/immunology, Listeria monocytogenes/*chemistry, Listeriosis/immunology, Male, Membrane Proteins/*immunology/*isolation & purification, Mice, Mice, Inbred BALB C, Microbiological Techniques, Molecular Weight, Sepharose | Phylogeny | 10.1007/BF00189376 |
Cultivation | 8373108 | Growth response of Listeria monocytogenes NCTC 7973 in two different media at four incubation temperatures. | Hany OE, Siddiqi R, Khan MA | Ann Acad Med Singap | 1993 | Culture Media, Hydrogen-Ion Concentration, Listeria monocytogenes/*growth & development, Temperature, Time Factors | ||
Metabolism | 8763623 | Transcriptional activation of virulence genes in wild-type strains of Listeria monocytogenes in response to a change in the extracellular medium composition. | Ripio MT, Dominguez-Bernal G, Suarez M, Brehm K, Berche P, Vazquez-Boland JA | Res Microbiol | 1996 | Animals, *Bacterial Toxins, Blotting, Western, Charcoal/metabolism, Culture Media, Gene Expression Regulation, Bacterial, Genes, Bacterial/*genetics, Heat-Shock Proteins/analysis/*biosynthesis, Hemolysin Proteins/analysis/*biosynthesis, In Vitro Techniques, Listeria monocytogenes/genetics/growth & development/*metabolism/pathogenicity, Mice, Phenotype, Type C Phospholipases/analysis/*biosynthesis, Virulence | Cultivation | 10.1016/0923-2508(96)84712-7 |
Metabolism | 8809771 | Differential regulation of the virulence genes of Listeria monocytogenes by the transcriptional activator PrfA. | Bohne J, Kestler H, Uebele C, Sokolovic Z, Goebel W | Mol Microbiol | 1996 | Bacterial Proteins/*genetics/metabolism, Gene Deletion, Gene Dosage, *Gene Expression Regulation, Bacterial, Genetic Complementation Test, Listeria monocytogenes/*genetics/metabolism/pathogenicity, Peptide Termination Factors, Trans-Activators/*genetics/metabolism, Virulence/genetics | 10.1111/j.1365-2958.1996.tb02639.x | |
Biotechnology | 8880303 | Listeriolysin O production and pathogenicity of non-growing Listeria monocytogenes stored at refrigeration temperature. | Buncic S, Avery SM, Rogers AR | Int J Food Microbiol | 1996 | *Bacterial Toxins, *Food Microbiology, Heat-Shock Proteins/*metabolism, Hemolysin Proteins/*metabolism, Humans, Hydrogen-Ion Concentration, Listeria monocytogenes/*metabolism/*pathogenicity, *Refrigeration, Species Specificity, Time Factors | Pathogenicity | 10.1016/0168-1605(96)00973-7 |
Metabolism | 8951812 | Specific binding of the Listeria monocytogenes transcriptional regulator PrfA to target sequences requires additional factor(s) and is influenced by iron. | Bockmann R, Dickneite C, Middendorf B, Goebel W, Sokolovic Z | Mol Microbiol | 1996 | Bacterial Proteins/*genetics/isolation & purification/*metabolism, *Bacterial Toxins, Culture Media/pharmacology, DNA, Bacterial/*metabolism, Escherichia coli/metabolism, Gene Expression, Heat-Shock Proteins/*genetics, Hemolysin Proteins, Humans, Iron/*pharmacology, Listeria monocytogenes, Membrane Proteins/*genetics, Peptide Termination Factors, *Promoter Regions, Genetic, Recombinant Fusion Proteins/genetics/isolation & purification, Trans-Activators/genetics/isolation & purification/*metabolism | Enzymology | 10.1046/j.1365-2958.1996.d01-1722.x |
Biotechnology | 9039562 | Insufficient antilisterial capacity of low inoculum Lactobacillus cultures on long-term stored meats at 4 degrees C. | Buncic S, Avery SM, Moorhead SM | Int J Food Microbiol | 1997 | Bacteriocins/biosynthesis, Cold Temperature, *Food Microbiology, Food Preservation, Lactobacillus/*physiology, Listeria monocytogenes/*growth & development, Meat/*microbiology | 10.1016/s0168-1605(96)01181-6 | |
Metabolism | 9076743 | Carbon-source regulation of virulence gene expression in Listeria monocytogenes. | Milenbachs AA, Brown DP, Moors M, Youngman P | Mol Microbiol | 1997 | Bacterial Proteins/*genetics, Blotting, Northern, Cellobiose/immunology/metabolism/pharmacology, DNA Probes/genetics, DNA, Bacterial/genetics, Electrophoresis, Polyacrylamide Gel, Fructose/metabolism/pharmacology, Galactose/metabolism/pharmacology, *Gene Expression Regulation, Bacterial, Glucose/metabolism/pharmacology, Hemolysin Proteins/genetics/metabolism, Immunoblotting, Listeria monocytogenes/*genetics/metabolism/*pathogenicity, Maltose/metabolism/pharmacology, Nucleic Acid Hybridization, Peptide Termination Factors, Phosphatidylinositol Diacylglycerol-Lyase, Phosphoric Diester Hydrolases/genetics/metabolism, RNA, Messenger/analysis/metabolism, Regulon/*genetics, Signal Transduction, Sucrose/metabolism/pharmacology, Trans-Activators/*genetics, Trehalose/metabolism/pharmacology, Virulence/*genetics | Enzymology | 10.1046/j.1365-2958.1997.2711634.x |
Genetics | 9673243 | Regulation of hly expression in Listeria monocytogenes by carbon sources and pH occurs through separate mechanisms mediated by PrfA. | Behari J, Youngman P | Infect Immun | 1998 | Alleles, Amino Acid Sequence, Bacterial Proteins/*genetics, *Bacterial Toxins, *Carbohydrate Metabolism, Carbon, *Gene Expression Regulation, Bacterial, Genes, Reporter, Glucuronidase/genetics, Heat-Shock Proteins/*genetics, Hemolysin Proteins, Hydrogen-Ion Concentration, Listeria monocytogenes/*genetics, Molecular Sequence Data, Peptide Termination Factors, Recombinant Fusion Proteins/genetics, Sequence Homology, Amino Acid, Trans-Activators/*genetics | Pathogenicity | 10.1128/IAI.66.8.3635-3642.1998 |
Biotechnology | 9810660 | Correlation between production of listeriolysin O by variants of Listeria monocytogenes and their virulence for rabbits. | Waseem M, Vahidy R, Khan MA | Zentralbl Bakteriol | 1995 | Animals, Bacterial Proteins/*biosynthesis, *Bacterial Toxins, Genetic Variation, Heat-Shock Proteins/*biosynthesis, Hemolysin Proteins/*biosynthesis, Listeria monocytogenes/*metabolism/*pathogenicity, Listeriosis/microbiology, Rabbits, Virulence | Pathogenicity | 10.1016/s0934-8840(11)80708-5 |
Metabolism | 10438775 | The bvr locus of Listeria monocytogenes mediates virulence gene repression by beta-glucosides. | Brehm K, Ripio MT, Kreft J, Vazquez-Boland JA | J Bacteriol | 1999 | Bacterial Proteins/*genetics/metabolism, Blotting, Southern, Cellobiose/pharmacology, Cloning, Molecular, DNA-Binding Proteins/genetics/metabolism, Gene Expression Regulation, Bacterial/*drug effects, Genes, Bacterial, Glucosides/*pharmacology, Glycoside Hydrolases/*genetics/metabolism, Listeria monocytogenes/enzymology/*genetics/*pathogenicity, Membrane Transport Proteins/*genetics/metabolism, Molecular Sequence Data, Operon, Phospholipases/metabolism, Repressor Proteins/genetics/metabolism, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Virulence | Enzymology | 10.1128/JB.181.16.5024-5032.1999 |
Metabolism | 16781848 | Adsorption on stainless steel surfaces of biosurfactants produced by gram-negative and gram-positive bacteria: consequence on the bioadhesive behavior of Listeria monocytogenes. | Meylheuc T, Methivier C, Renault M, Herry JM, Pradier CM, Bellon-Fontaine MN | Colloids Surf B Biointerfaces | 2006 | Adsorption, Bacterial Adhesion/*physiology, Food Microbiology, Gram-Negative Bacteria/*metabolism, Gram-Positive Bacteria/*metabolism, Lactobacillus helveticus/metabolism, Listeria monocytogenes/*metabolism, Microscopy, Atomic Force, Pseudomonas fluorescens/metabolism, Spectrum Analysis, Stainless Steel, Surface Properties, Surface-Active Agents/metabolism, X-Rays | Biotechnology | 10.1016/j.colsurfb.2006.04.016 |
Pathogenicity | 19610331 | Effects of essential oil treatment, gas atmosphere, and storage temperature on Listeria monocytogenes in a model vegetable system. | Scollard J, Francis GA, O'Beirne D | J Food Prot | 2009 | Consumer Product Safety, Food Contamination/prevention & control, Food Handling/*methods, Food Packaging/*methods, Food Preservation/*methods, Food Preservatives/*pharmacology, Gases/pharmacology, Humans, Listeria monocytogenes/drug effects/*growth & development, Microbial Sensitivity Tests, Models, Biological, Oils, Volatile/pharmacology, Temperature, Time Factors, Vegetables/*microbiology | 10.4315/0362-028x-72.6.1209 | |
Biotechnology | 19777890 | Effects of mussel processing soils on the adherence of Listeria monocytogenes to polypropylene and stainless steel. | Saa P, Cabo ML, Rodriguez JJ | J Food Prot | 2009 | Animals, Bacterial Adhesion/*physiology, Bivalvia/*microbiology, Colony Count, Microbial, Consumer Product Safety, *Equipment Contamination, Food Contamination/analysis/prevention & control, Food Microbiology, Humans, Kinetics, Listeria monocytogenes/growth & development/*physiology, Logistic Models, Polypropylenes, Shellfish/*microbiology, Stainless Steel | Pathogenicity | 10.4315/0362-028x-72.9.1885 |
Biotechnology | 21356446 | Resistance to benzalkonium chloride, peracetic acid and nisin during formation of mature biofilms by Listeria monocytogenes. | Saa Ibusquiza P, Herrera JJ, Cabo ML | Food Microbiol | 2010 | Benzalkonium Compounds/pharmacology, Biofilms/*growth & development, Colony Count, Microbial, Consumer Product Safety, Disinfectants/*pharmacology, Dose-Response Relationship, Drug, Drug Resistance, Multiple, Bacterial, Food Microbiology, Kinetics, Listeria monocytogenes/*drug effects/*physiology/ultrastructure, Logistic Models, Microscopy, Electron, Scanning, Models, Biological, Nisin/pharmacology, Peracetic Acid/pharmacology | Enzymology | 10.1016/j.fm.2010.09.014 |
27494720 | Quantitative image analysis to characterize the dynamics of Listeria monocytogenes biofilms. | Mosquera-Fernandez M, Sanchez-Vizuete P, Briandet R, Cabo ML, Balsa-Canto E | Int J Food Microbiol | 2016 | *Biofilms, Listeria monocytogenes/growth & development/*physiology/ultrastructure, Microscopy, Confocal | 10.1016/j.ijfoodmicro.2016.07.015 | ||
31003300 | Survival of Listeria monocytogenes in Ground Beef or Liver During Storage at 4 and 25 degrees C. | Shelef LA | J Food Prot | 1989 | 10.4315/0362-028X-52.6.379 | |||
31207825 | Antilisterial Effects of a Sorbate-Nisin Combination In Vitro and on Packaged Beef at Refrigeration Temperature. | Avery SM, Buncic S | J Food Prot | 1997 | 10.4315/0362-028X-60.9.1075 | |||
Metabolism | 31521800 | Listeriolysin S may inhibit the anti-listerial properties of Lactobacillus plantarum. | Mohammadzadeh R, Azadegan A, Kalani BS | Microb Pathog | 2019 | Bacteriocins/metabolism, Caco-2 Cells, Coculture Techniques, Gene Expression Regulation, Bacterial, Hemolysin Proteins/*antagonists & inhibitors/chemistry/classification/genetics, Humans, Lactobacillus plantarum/*metabolism, Listeria/*drug effects, Listeria monocytogenes/*metabolism, Phylogeny, Probiotics, Sequence Alignment, Sequence Analysis, Protein, Virulence Factors/antagonists & inhibitors | Phylogeny | 10.1016/j.micpath.2019.103744 |
Enzymology | 33049077 | Chemical composition and antimicrobial activity of Osage orange (Maclura pomifera) leaf extracts. | Filip S, Durovic S, Blagojevic S, Tomic A, Ranitovic A, Gasic U, Tesic Z, Zekovic Z | Arch Pharm (Weinheim) | 2020 | Anti-Bacterial Agents/chemistry/isolation & purification/*pharmacology, Dose-Response Relationship, Drug, Enterococcus faecalis/*drug effects, Listeria monocytogenes/*drug effects, Maclura/*chemistry, Microbial Sensitivity Tests, Molecular Structure, Plant Extracts/chemistry/isolation & purification/*pharmacology, Plant Leaves/chemistry, Structure-Activity Relationship | Phylogeny | 10.1002/ardp.202000195 |
Phylogeny | 33572838 | Diversity and Antimicrobial Activity towards Listeria spp. and Escherichia coli among Lactic Acid Bacteria Isolated from Ready-to-Eat Seafood. | Stupar J, Holoymoen IG, Hoel S, Lerfall J, Rustad T, Jakobsen AN | Foods | 2021 | 10.3390/foods10020271 |
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
23536 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102976 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102976) | |
35019 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10986 | ||
42076 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/16741 | ||
65601 | Curators of the CCUG | https://www.ccug.se/strain?id=15527 | Culture Collection University of Gothenburg (CCUG) (CCUG 15527) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
68370 | Automatically annotated from API 20STR | |||
68371 | Automatically annotated from API 50CH acid | |||
68376 | Automatically annotated from API LIST | |||
68379 | Automatically annotated from API Coryne | |||
68380 | Automatically annotated from API rID32A | |||
68381 | Automatically annotated from API rID32STR | |||
68382 | Automatically annotated from API zym | |||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
90131 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID35930.1 | |
90132 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID380837.1 | |
121128 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104794 | Collection of Institut Pasteur (CIP 104794) |