General

@ref: 23456

BacDive-ID: 131660

DSM-Number: 103241

keywords: 16S sequence, Bacteria, mesophilic

description: Brevibacterium metallicum NM2E3 is a mesophilic bacterium that was isolated from Plants grown in a heavy metal contaminated region, root tissue .

NCBI tax id

• NCBI tax id: 1701
• Matching level: species

strain history

• @ref: 23456
• history: <- BCCM/LMG, University of Gent, Belgium; LMG 28673 <- Sui Xinhua, China Agricultural University, Beijing <-B. Roman-Ponce and E.T. Wang; NM2E3

doi: 10.13145/bacdive131660.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Micrococcales
• family: Brevibacteriaceae
• genus: Brevibacterium
• species: Brevibacterium metallicum
• full scientific name: Brevibacterium metallicum corrig. Roman-Ponce et al. 2015

• synonyms

  • @ref: 20215
  • synonym: Brevibacterium metallicus

@ref: 23456

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Brevibacteriaceae

genus: Brevibacterium

species: Brevibacterium sp.

full scientific name: Brevibacterium sp.

strain designation: NM2E3

type strain: no

Culture and growth conditions

culture medium

• @ref: 23456
• name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
• growth: yes
• link: https://mediadive.dsmz.de/medium/92
• composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

• @ref: 23456
• growth: positive
• type: growth
• temperature: 28
• range: mesophilic

Isolation, sampling and environmental information

isolation

• @ref: 23456
• sample type: Plants grown in a heavy metal contaminated region, root tissue ( Prosopis laegivata)
• host species: Prosopis laegivata
• geographic location: Villa de la Paz, San Luis Potosi
• country: Mexico
• origin.country: MEX
• continent: North America

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_53188.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15817;96_1988;97_2390;98_38109;99_53188&stattab=map
• Last taxonomy: Brevibacterium
• 16S sequence: KM874400
• Sequence Identity:
• Total samples: 929
• soil counts: 220
• aquatic counts: 42
• animal counts: 659
• plant counts: 8

Sequence information

16S sequences

• @ref: 23456
• description: Brevibacterium sp. NM2E3 16S ribosomal RNA gene, partial sequence
• accession: KM874400
• length: 1403
• database: ena
• NCBI tax ID: 1578756

External links

@ref: 23456

culture collection no.: DSM 103241, CCBAU 101093, HAMBI 3627, LMG 28673

literature

• topic: Phylogeny
• Pubmed-ID: 26429721
• title: Brevibacterium metallicus sp. nov., an endophytic bacterium isolated from roots of Prosopis laegivata grown at the edge of a mine tailing in Mexico.
• authors: Roman-Ponce B, Li YH, Vasquez-Murrieta MS, Sui XH, Chen WF, Estrada-de Los Santos P, Wang ET
• journal: Arch Microbiol
• DOI: 10.1007/s00203-015-1156-6
• year: 2015
• mesh: Bacterial Typing Techniques, Base Composition/genetics, Brevibacterium/classification/genetics/*isolation & purification/*metabolism, DNA, Bacterial/genetics, Fatty Acids/analysis, Metals, Heavy/*metabolism, Mexico, Mining, Nucleic Acid Hybridization, Phylogeny, Plant Roots/*microbiology, Prosopis/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Symbiosis/*physiology, Vitamin K 2/analysis
• topic2: Metabolism

Reference