Strain identifier

BacDive ID: 131565

Type strain: No

Species: Vogesella oryzae

Strain Designation: L1E9

Strain history: <- N. Ramesh Kumar, Nat. Inst. of Interdisciplinary Science and Technol., Thiruvananthapuram, Kerala, India; L1E9

NCBI tax ID(s): 1735285 (species)

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General

@ref: 22792

BacDive-ID: 131565

DSM-Number: 28782

keywords: 16S sequence, Bacteria

description: Vogesella oryzae L1E9 is a bacterium that was isolated from rice rhizosphere.

NCBI tax id

  • NCBI tax id: 1735285
  • Matching level: species

strain history

  • @ref: 22792
  • history: <- N. Ramesh Kumar, Nat. Inst. of Interdisciplinary Science and Technol., Thiruvananthapuram, Kerala, India; L1E9

doi: 10.13145/bacdive131565.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Neisseriales
  • family: Chromobacteriaceae
  • genus: Vogesella
  • species: Vogesella oryzae
  • full scientific name: Vogesella oryzae Rameshkumar et al. 2017

@ref: 22792

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Chromobacteriaceae, not assigned to order

family: Chromobacteriaceae

genus: Vogesella

species: Vogesella oryzae

full scientific name: Vogesella oryzae

strain designation: L1E9

type strain: no

Morphology

multimedia

  • @ref: 22792
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_28782.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Isolation, sampling and environmental information

isolation

  • @ref: 22792
  • sample type: rice rhizosphere
  • geographic location: Kerala
  • country: India
  • origin.country: IND
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Rhizosphere

taxonmaps

  • @ref: 69479
  • File name: preview.99_176285.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15355;96_559;97_33904;98_43644;99_176285&stattab=map
  • Last taxonomy: Vogesella oryzae subclade
  • 16S sequence: KR363131
  • Sequence Identity:
  • Total samples: 287
  • soil counts: 50
  • aquatic counts: 188
  • animal counts: 28
  • plant counts: 21

Sequence information

16S sequences

  • @ref: 22792
  • description: Vogesella oryzae strain L1E9 16S ribosomal RNA gene, partial sequence
  • accession: KR363131
  • length: 1478
  • database: nuccore
  • NCBI tax ID: 1735285

External links

@ref: 22792

culture collection no.: DSM 28782

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
22792Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-28782Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28782)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/