Strain identifier

BacDive ID: 131490

Type strain: No

Species: Halopolyspora algeriensis

Strain Designation: H151

Strain history: <- N. Sabaou, Kouba, Alger, Algeria; H151 <- A. Meklat et al.

NCBI tax ID(s): 1500506 (species)

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General

@ref: 22717

BacDive-ID: 131490

DSM-Number: 45969

keywords: 16S sequence, Bacteria

description: Halopolyspora algeriensis H151 is a bacterium that was isolated from soil from a palm grove.

NCBI tax id

  • NCBI tax id: 1500506
  • Matching level: species

strain history

  • @ref: 22717
  • history: <- N. Sabaou, Kouba, Alger, Algeria; H151 <- A. Meklat et al.

doi: 10.13145/bacdive131490.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Pseudonocardiales
  • family: Pseudonocardiaceae
  • genus: Halopolyspora
  • species: Halopolyspora algeriensis
  • full scientific name: Halopolyspora algeriensis (Saker et al. 2015) Lai et al. 2017

  • synonyms

    • @ref: 20215
    • synonym: Mzabimyces algeriensis

@ref: 22717

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinopolysporales

family: Actinopolysporaceae

genus: Halopolyspora

species: Halopolyspora algeriensis

full scientific name: Halopolyspora algeriensis (Saker et al. 2015) Lai et al. 2017

strain designation: H151

type strain: no

Morphology

multimedia

@refmultimedia contentcaptionintellectual property rights
66793EM_DSM_45969_1.jpgelectron microscopic image© HZI/Manfred Rohde
66793EM_DSM_45969_2.jpgelectron microscopic image© HZI/Manfred Rohde
66793EM_DSM_45969_3.jpgelectron microscopic image© HZI/Manfred Rohde
66793EM_DSM_45969_4.jpgelectron microscopic image© HZI/Manfred Rohde
66793EM_DSM_45969_5.jpgelectron microscopic image© HZI/Manfred Rohde

Culture and growth conditions

culture medium

  • @ref: 22717
  • name: CM-MEDIUM (DSMZ Medium 1504)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1504
  • composition: Name: CM MEDIUM (DSMZ Medium 1504) Composition: NaCl 150.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Peptone 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O Distilled water

culture temp

  • @ref: 22717
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 22717
  • sample type: soil from a palm grove
  • geographic location: Sahara, Ghardaia (32° 27' N, 3° 41' E), Béni-Isguen, Ahbas palm grove
  • country: Algeria
  • origin.country: DZA
  • continent: Africa
  • latitude: 32.45
  • longitude: 3.6833

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Grove (Orchard)
#Environmental#Terrestrial#Soil
#Host#Plants#Tree

taxonmaps

  • @ref: 69479
  • File name: preview.99_90850.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15822;96_37569;97_47770;98_62640;99_90850&stattab=map
  • Last taxonomy: Halopolyspora
  • 16S sequence: KJ574201
  • Sequence Identity:
  • Total samples: 431
  • soil counts: 137
  • aquatic counts: 46
  • animal counts: 191
  • plant counts: 57

Safety information

risk assessment

  • @ref: 22717
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 22717
  • description: Halopolyspora algeriensis strain H151 16S ribosomal RNA gene, partial sequence
  • accession: KJ574201
  • length: 1403
  • database: nuccore
  • NCBI tax ID: 1500506

GC content

  • @ref: 22717
  • GC-content: 68.3
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 22717

culture collection no.: DSM 45969

straininfo link

  • @ref: 89907
  • straininfo: 401287

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
22717Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-45969Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45969)
66793Mukherjee et al.GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life10.1038/nbt.3886 35: 676-683 201728604660
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar SchomburgBRENDA, the ELIXIR core data resource in 2021: new developments and updates10.1093/nar/gkaa1025Nucleic Acids Res. 49: D498-D508 202033211880
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
89907Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID401287.1