Strain identifier
BacDive ID: 131466
Type strain: 
Species: Streptomyces sasae
Strain Designation: JR-39
Strain history: <- KACC; KACC 17182 <- K.S. Whang (Mokwon univ.); JR-39
NCBI tax ID(s): 1266772 (species)
version 8.1 (current version)
General
@ref: 22693
BacDive-ID: 131466
DSM-Number: 102002
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces sasae JR-39 is a mesophilic bacterium that was isolated from bamboo Sasa borealis rizosphere soil.
NCBI tax id
- NCBI tax id: 1266772
- Matching level: species
strain history
- @ref: 22693
- history: <- KACC; KACC 17182 <- K.S. Whang (Mokwon univ.); JR-39
doi: 10.13145/bacdive131466.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces sasae
- full scientific name: Streptomyces sasae Lee and Whang 2015
@ref: 22693
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces sasae
full scientific name: Streptomyces sasae Lee and Whang 2015
strain designation: JR-39
type strain: yes
Morphology
multimedia
- @ref: 22693
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_102002.jpg
- caption: Medium 987 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 22693 | ISP2 MEDIUM (DSMZ Medium 987) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium987.pdf | |
| 22693 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf | |
| 22693 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
culture temp
- @ref: 22693
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 22693
- sample type: bamboo Sasa borealis rizosphere soil
- host species: Sasa borealis
- geographic location: Damyang
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Rhizosphere |
Safety information
risk assessment
- @ref: 22693
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 22693
- description: Streptomyces sasae strain JR-39 16S ribosomal RNA gene, partial sequence
- accession: HQ267987
- length: 1444
- database: ena
- NCBI tax ID: 1266772
GC content
- @ref: 22693
- GC-content: 72.3
External links
@ref: 22693
culture collection no.: DSM 102002, KACC 17182, NBRC 109809
straininfo link
- @ref: 89885
- straininfo: 401736
literature
- topic: Phylogeny
- Pubmed-ID: 26296574
- title: Streptomyces sasae sp. nov., isolated from bamboo (Sasa borealis) rhizosphere soil.
- authors: Lee HJ, Whang KS
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijsem.0.000454
- year: 2015
- mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/genetics, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, *Rhizosphere, Sasa/*microbiology, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22693 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102002 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102002) | |
| 89885 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401736.1 |