Strain identifier
BacDive ID: 131444
Type strain: 
Species: Pseudoalteromonas hodoensis
Strain Designation: H7
Variant: Isotype of BacDive ID 131443
Strain history: <- W-J Chi, Myongji Univ.
NCBI tax ID(s): 1081601 (species)
General
@ref: 22671
BacDive-ID: 131444
DSM-Number: 25967
keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative
description: Pseudoalteromonas hodoensis H7 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from coastal seawater.
NCBI tax id
- NCBI tax id: 1081601
- Matching level: species
strain history
| @ref | history |
|---|---|
| 22671 | <- S. K. Hong, Myongji University, Appl. Molecular Microbiology Lab., Dept Biol. Science; H7 <- W.-J. Chi and S. K. Hong |
| 67771 | <- W-J Chi, Myongji Univ. |
doi: 10.13145/bacdive131444.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Pseudoalteromonadaceae
- genus: Pseudoalteromonas
- species: Pseudoalteromonas hodoensis
- full scientific name: Pseudoalteromonas hodoensis Chi et al. 2014
@ref: 22671
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Pseudoalteromonadaceae
genus: Pseudoalteromonas
species: Pseudoalteromonas hodoensis
full scientific name: Pseudoalteromonas hodoensis Chi et al. 2014
strain designation: H7
variant: Isotype of BacDive ID 131443
type strain: no
Morphology
cell morphology
- @ref: 67771
- gram stain: negative
colony morphology
- @ref: 22671
- incubation period: 2-3 days
Culture and growth conditions
culture medium
- @ref: 22671
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 22671 | positive | growth | 28 | mesophilic |
| 67771 | positive | growth | 28-30 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 67771
- oxygen tolerance: aerobe
compound production
- @ref: 22671
- compound: agarase
observation
- @ref: 67771
- observation: quinones: Q-8
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 22671 | coastal seawater | West Sea, Ho Island, Boryeong city | Republic of Korea | KOR | Asia |
| 67771 | From sewater | Daechon | Republic of Korea | KOR | Asia |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Terrestrial | #Coast |
Sequence information
16S sequences
- @ref: 22671
- description: Pseudoalteromonas sp. H7 16S ribosomal RNA gene, partial sequence
- accession: JN578478
- length: 1439
- database: ena
- NCBI tax ID: 1081601
GC content
- @ref: 67771
- GC-content: 45.82
External links
@ref: 22671
culture collection no.: DSM 25967, KCTC 23887
literature
- topic: Enzymology
- Pubmed-ID: 24879592
- title: Production and characterization of a novel thermostable extracellular agarase from Pseudoalteromonas hodoensis newly isolated from the West Sea of South Korea.
- authors: Chi WJ, Park JS, Kang DK, Hong SK
- journal: Appl Biochem Biotechnol
- DOI: 10.1007/s12010-014-0958-3
- year: 2014
- mesh: Agar/metabolism, Enzyme Stability, Extracellular Space/*enzymology, Glycoside Hydrolases/biosynthesis/*chemistry/*metabolism, Hydrolysis, Phenotype, Phylogeny, Pseudoalteromonas/classification/cytology/*enzymology/*isolation & purification, Republic of Korea, Seawater/*microbiology, *Temperature
- topic2: Phylogeny
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22671 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25967 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25967) | |
| 67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc |