Strain identifier
BacDive ID: 131314
Type strain:
Species: Streptomonospora tuzyakensis
Strain Designation: BN506
Strain history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; BN506 <- K. Guven
NCBI tax ID(s): 1384037 (species)
General
@ref: 22541
BacDive-ID: 131314
DSM-Number: 45930
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomonospora tuzyakensis BN506 is a mesophilic bacterium that builds an aerial mycelium and was isolated from saline soil next to a salt lake.
NCBI tax id
- NCBI tax id: 1384037
- Matching level: species
strain history
- @ref: 22541
- history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; BN506 <- K. Guven
doi: 10.13145/bacdive131314.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptosporangiales
- family: Nocardiopsidaceae
- genus: Streptomonospora
- species: Streptomonospora tuzyakensis
- full scientific name: Streptomonospora tuzyakensis Tatar et al. 2016
@ref: 22541
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiopsaceae
genus: Streptomonospora
species: Streptomonospora tuzyakensis
full scientific name: Streptomonospora tuzyakensis Tatar et al. 2016
strain designation: BN506
type strain: yes
Morphology
colony morphology
@ref | colony color | medium used |
---|---|---|
69453 | Beige (1001) | ISP 6 |
69453 | Ivory (1014) | ISP 2 |
69453 | Ivory (1014), light ivory (1015) | ISP 4 |
69453 | Ivory (1014), light ivory (1015) | ISP 7 |
69453 | Khaki grey (7008) | suter without tyrosine |
69453 | Light ivory (1015) | ISP 3 |
69453 | Light ivory (1015) | ISP 5 |
69453 | Ochre yellow (1024) | suter with tyrosine |
multicellular morphology
@ref | forms multicellular complex | complex name | medium name | complex color |
---|---|---|---|---|
69453 | no | Aerial mycelium | ISP 2 | |
69453 | no | Aerial mycelium | ISP 3 | |
69453 | no | Aerial mycelium | ISP 4 | |
69453 | yes | Aerial mycelium | ISP 5 | Oyster white (1013) |
69453 | no | Aerial mycelium | ISP 6 | |
69453 | no | Aerial mycelium | ISP 7 | |
69453 | no | Aerial mycelium | suter with tyrosine | |
69453 | yes | Aerial mycelium | suter without tyrosine | Pure white (9010) |
pigmentation
@ref | production | name |
---|---|---|
69453 | no | Melanin |
69453 | no | soluble pigment |
multimedia
@ref | multimedia content | caption | intellectual property rights |
---|---|---|---|
22541 | https://www.dsmz.de/microorganisms/photos/DSM_45930.jpg | Medium 514 37°C | © Leibniz-Institut DSMZ |
69453 | DSM_45930_image3.jpeg | Plates (514, ISP2, ISP3, ISP4, ISP5, ISP7) | Helmholtz-Zentrum für Infektionsforschung GmbH |
69453 | DSM_45930_image4.jpeg | Plates (514, ISP2, ISP3, ISP4, ISP5, ISP7) | Helmholtz-Zentrum für Infektionsforschung GmbH |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
22541 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
22541 | GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) | yes | https://mediadive.dsmz.de/medium/1159 | Name: GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) Composition: NaCl 100.0 g/l Agar 15.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
culture temp
- @ref: 22541
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
halophily
- @ref: 69453
- salt: NaCl
- growth: positive
- tested relation: growth
- concentration: 0-7.5 %
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
69453 | 22599 | arabinose | + | growth |
69453 | 62968 | cellulose | +/- | growth |
69453 | 28757 | fructose | + | growth |
69453 | 17234 | glucose | + | growth |
69453 | 17268 | inositol | - | growth |
69453 | 37684 | mannose | +/- | growth |
69453 | 16634 | raffinose | + | growth |
69453 | 26546 | rhamnose | + | growth |
69453 | 17992 | sucrose | + | growth |
69453 | 18222 | xylose | + | growth |
68379 | 17632 | nitrate | - | reduction |
68379 | 4853 | esculin | - | hydrolysis |
68379 | 16199 | urea | - | hydrolysis |
68379 | 5291 | gelatin | + | hydrolysis |
68379 | 17634 | D-glucose | - | fermentation |
68379 | 16988 | D-ribose | - | fermentation |
68379 | 65327 | D-xylose | - | fermentation |
68379 | 16899 | D-mannitol | - | fermentation |
68379 | 17306 | maltose | - | fermentation |
68379 | 17716 | lactose | - | fermentation |
68379 | 17992 | sucrose | - | fermentation |
68379 | 28087 | glycogen | - | fermentation |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68379 | gelatinase | + | |
68379 | urease | - | 3.5.1.5 |
68379 | beta-glucosidase | - | 3.2.1.21 |
68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68379 | alpha-glucosidase | - | 3.2.1.20 |
68379 | beta-galactosidase | - | 3.2.1.23 |
68379 | beta-glucuronidase | - | 3.2.1.31 |
68379 | alkaline phosphatase | + | 3.1.3.1 |
68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
68379 | pyrazinamidase | - | 3.5.1.B15 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | lipase (C 14) | - | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | + | 3.4.21.1 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | beta-galactosidase | + | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API coryne
@ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
69453 | - | - | + | + | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - |
API zym
@ref | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
69453 | + | +/- | +/- | - | + | +/- | - | - | + | +/- | + | +/- | + | - | + | +/- | +/- | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 22541
- sample type: saline soil next to a salt lake
- geographic location: Konya, Tuz Lake (38° 55' 53.68'' N and 33° 13' 54.72''E )
- country: Turkey
- origin.country: TUR
- continent: Asia
- latitude: 38.9316
- longitude: 33.2319
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Condition | #Saline |
taxonmaps
- @ref: 69479
- File name: preview.99_45660.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_152;96_2754;97_13042;98_33085;99_45660&stattab=map
- Last taxonomy: Streptomonospora tuzyakensis subclade
- 16S sequence: KC959224
- Sequence Identity:
- Total samples: 5
- aquatic counts: 1
- animal counts: 3
- plant counts: 1
Safety information
risk assessment
- @ref: 22541
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 22541
- description: Streptomonospora tuzyakensis strain BN506 16S ribosomal RNA gene, partial sequence
- accession: KC959224
- length: 1490
- database: ena
- NCBI tax ID: 1384037
GC content
- @ref: 22541
- GC-content: 71.1
- method: high performance liquid chromatography (HPLC)
External links
@ref: 22541
culture collection no.: DSM 45930, KCTC 29210
straininfo link
- @ref: 89755
- straininfo: 400478
literature
- topic: Phylogeny
- Pubmed-ID: 26459342
- title: Streptomonospora tuzyakensis sp. nov., a halophilic actinomycete isolated from saline soil.
- authors: Tatar D, Guven K, Inan K, Cetin D, Belduz AO, Sahin N
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-015-0607-z
- year: 2015
- mesh: Actinomycetales/chemistry/*classification/genetics/*isolation & purification/physiology, Base Sequence, Cell Wall/chemistry, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Diaminopimelic Acid/analysis/chemistry, Fatty Acids/analysis, Lakes, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity, Turkey
- topic2: Genetics
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
22541 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45930 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45930) | |
68379 | Automatically annotated from API Coryne | |||
68382 | Automatically annotated from API zym | |||
69453 | Wink, J. | Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig | https://cdn.dsmz.de/wink/DSM%2045930.pdf | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
89755 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID400478.1 |