Strain identifier

BacDive ID: 13111

Type strain: Yes

Species: Pseudomonas jessenii

Culture col. no.: DSM 17150, CCM 4840, CFML 95-307, CIP 105274, CCUG 42059

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 6791

BacDive-ID: 13111

DSM-Number: 17150

keywords: Bacteria, 16S sequence, genome sequence, aerobe, mesophilic

description: Pseudomonas jessenii DSM 17150 is an aerobe, mesophilic bacterium that was isolated from mineral water.

strain history: <- CCM <- CCUG <- CIP <- D. Izard

doi: 10.13145/bacdive13111.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Pseudomonas
  • species: Pseudomonas jessenii
  • full scientific name: Pseudomonas jessenii Verhille et al. 1999

@ref: 6791

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas jessenii

full scientific name: Pseudomonas jessenii Verhille et al. 1999 emend. Kosina et al. 2013

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
6791CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium220.pdf
39252MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
6791positivegrowth30mesophilic
39252positivegrowth30mesophilic
55323positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 55323
  • oxygen tolerance: aerobe

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
6791+--+----+++++-++-++++

Isolation, sampling and environmental information

isolation

  • @ref: 6791
  • sample type: mineral water
  • country: France
  • origin.country: FRA
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic

Safety information

risk assessment

  • @ref: 6791
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 6791
  • description: Pseudomonas jessenii 16S ribosomal RNA gene, complete sequence
  • accession: AF068259
  • length: 1515
  • database: ena
  • NCBI tax ID: 77298

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Pseudomonas jessenii BS3660GCA_900104905contigncbi77298
66792Pseudomonas jessenii DSM 17150GCA_002236115contigncbi77298
66792Pseudomonas jessenii LBp-160603GCA_003205375scaffoldncbi77298
66792Pseudomonas jessenii E2333GCA_003353505scaffoldncbi77298
66792Pseudomonas jessenii EC-S101GCA_006151795scaffoldncbi77298
66792Pseudomonas jessenii GO3GCA_003225755contigncbi77298
66792Pseudomonas jessenii strain BS366077298.3wgspatric77298
66792Pseudomonas jessenii strain DSM 1715077298.8wgspatric77298
66792Pseudomonas jessenii strain DSM 1715077298.9wgspatric77298
66792Pseudomonas jessenii strain E233377298.13wgspatric77298
66792Pseudomonas jessenii strain EC-S10177298.14wgspatric77298
66792Pseudomonas jessenii strain GO377298.12wgspatric77298
66792Pseudomonas jessenii strain LBp-16060377298.11wgspatric77298
66792Pseudomonas jessenii LMG 216052639762619permanentimg77298
66792Pseudomonas jessenii E23332767802472permanentimg77298

External links

@ref: 6791

culture collection no.: DSM 17150, CCM 4840, CFML 95-307, CIP 105274, CCUG 42059

straininfo link

@refpassport
20218http://www.straininfo.net/strains/386529
20218http://www.straininfo.net/strains/327643
20218http://www.straininfo.net/strains/125557
20218http://www.straininfo.net/strains/757713

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
6791Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17150)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17150
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
39252Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/17275
55323Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 42059)https://www.ccug.se/strain?id=42059
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)