Strain identifier
BacDive ID: 131105
Type strain:
Species: Idiomarina sp.
Strain Designation: YIM-Y3
Strain history: <- X.-L. Cui, YIM; YIM-Y3
NCBI tax ID(s): 1874361 (species)
version 8.1 (current version)
General
@ref: 22397
BacDive-ID: 131105
DSM-Number: 17052
keywords: 16S sequence, Bacteria, mesophilic
description: Idiomarina sp. YIM-Y3 is a mesophilic bacterium that was isolated from Soil sample from Yipinglang salt mine.
NCBI tax id
- NCBI tax id: 1874361
- Matching level: species
strain history
- @ref: 22397
- history: <- X.-L. Cui, YIM; YIM-Y3
doi: 10.13145/bacdive131105.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Idiomarinaceae
- genus: Idiomarina
- species: Idiomarina sp.
- full scientific name: Idiomarina Ivanova et al. 2000
@ref: 22397
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Idiomarinaceae
genus: Idiomarina
species: Idiomarina sp.
full scientific name: Idiomarina sp.
strain designation: YIM-Y3
type strain: no
Culture and growth conditions
culture medium
- @ref: 22397
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 22397
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 22397
- sample type: Soil sample from Yipinglang salt mine
- geographic location: Yunnan Province
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Other | #Mine |
#Environmental | #Terrestrial | #Soil |
#Condition | #Saline |
Sequence information
16S sequences
- @ref: 22397
- description: Idiomarina sp. Y3 16S ribosomal RNA gene, partial sequence
- accession: EF177665
- length: 1502
- database: ena
- NCBI tax ID: 418739
External links
@ref: 22397
culture collection no.: DSM 17052
straininfo link
- @ref: 89564
- straininfo: 399165
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
22397 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-17052 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17052) | |
89564 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399165.1 |