Strain identifier
BacDive ID: 130938
Type strain:
Species: Desulfovibrio sp.
Strain Designation: IFRC170
Strain history: <- Ch. Schadt, Oak Ridge National Laboratory, TN, USA; IFRC170 <- T. Gihring
NCBI tax ID(s): 885 (species)
General
@ref: 22230
BacDive-ID: 130938
DSM-Number: 24454
keywords: Bacteria, anaerobe
description: Desulfovibrio sp. IFRC170 is an anaerobe bacterium that was isolated from Oak Ridge integrated field res. challenge area.
NCBI tax id
- NCBI tax id: 885
- Matching level: species
strain history
- @ref: 22230
- history: <- Ch. Schadt, Oak Ridge National Laboratory, TN, USA; IFRC170 <- T. Gihring
doi: 10.13145/bacdive130938.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfovibrionales
- family: Desulfovibrionaceae
- genus: Desulfovibrio
- species: Desulfovibrio sp.
- full scientific name: Desulfovibrio Kluyver and van Niel 1936 (Approved Lists 1980)
synonyms
@ref synonym 20215 Alteridesulfovibrio 20215 Frigididesulfovibrio 20215 Desulfomonas 20215 Psychrodesulfovibrio 20215 Aminidesulfovibrio
@ref: 22230
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfovibrionales
family: Desulfovibrionaceae
genus: Desulfovibrio
species: Desulfovibrio sp.
full scientific name: Desulfovibrio sp.
strain designation: IFRC170
type strain: no
Morphology
colony morphology
- @ref: 22230
- incubation period: 2-3 days
Culture and growth conditions
culture medium
- @ref: 22230
- name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)
- growth: yes
- link: https://mediadive.dsmz.de/medium/194
- composition: Name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194; with strain-specific modifications) Composition: Na2SO4 2.99103 g/l Na-L-lactate 2.49252 g/l Na2CO3 1.49551 g/l NaCl 0.997009 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l MgCl2 x 6 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
culture temp
- @ref: 22230
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
oxygen tolerance
- @ref: 22230
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 22230
- sample type: Oak Ridge integrated field res. challenge area
- geographic location: TN
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | |
#Host | #Plants | #Tree |
Sequence information
GC content
- @ref: 22230
- GC-content: 62.8
- method: sequence analysis
External links
@ref: 22230
culture collection no.: DSM 24454
straininfo link
- @ref: 89415
- straininfo: 404609
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
22230 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24454 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24454) | |
89415 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID404609.1 |