Strain identifier
BacDive ID: 130935
Type strain: 
Species: Corynebacterium glutamicum
Strain Designation: MB001
Strain history: <- M. Baumgart, Forschungszentzum Jülich, Institute of Bio- und Geosciences IBG-1; MB001
NCBI tax ID(s): 1718 (species)
version 8.1 (current version)
General
@ref: 22227
BacDive-ID: 130935
DSM-Number: 102070
keywords: genome sequence, Bacteria, mesophilic
description: Corynebacterium glutamicum MB001 is a mesophilic bacterium of the family Corynebacteriaceae.
NCBI tax id
- NCBI tax id: 1718
- Matching level: species
strain history
- @ref: 22227
- history: <- M. Baumgart, Forschungszentzum Jülich, Institute of Bio- und Geosciences IBG-1; MB001
doi: 10.13145/bacdive130935.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Corynebacteriaceae
- genus: Corynebacterium
- species: Corynebacterium glutamicum
- full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 (Approved Lists 1980)
synonyms
@ref synonym 20215 Micrococcus glutamicus 20215 Brevibacterium divaricatum 20215 Corynebacterium lilium
@ref: 22227
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Corynebacteriaceae
genus: Corynebacterium
species: Corynebacterium glutamicum
full scientific name: Corynebacterium glutamicum (Kinoshita et al. 1958) Abe et al. 1967 emend. Nouioui et al. 2018
strain designation: MB001
type strain: no
Morphology
colony morphology
- @ref: 22227
- incubation period: 1-2 days
multimedia
- @ref: 22227
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_102070.jpg
- caption: Medium 535 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 22227
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 22227
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 22227
- country: Germany
- origin.country: DEU
- continent: Europe
Safety information
risk assessment
- @ref: 22227
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Corynebacterium glutamicum MB001 | 2554235405 | complete | img | 1310161 |
| 66792 | Corynebacterium glutamicum MB001 | GCA_000445015 | complete | ncbi | 1310161 |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 92.706 | no |
| flagellated | no | 96.794 | no |
| gram-positive | yes | 87.582 | no |
| anaerobic | no | 99.314 | no |
| aerobic | yes | 71.361 | no |
| halophile | yes | 64.994 | no |
| spore-forming | no | 92.549 | no |
| thermophile | no | 97.766 | yes |
| glucose-util | yes | 86.536 | no |
| glucose-ferment | yes | 72.431 | no |
External links
@ref: 22227
culture collection no.: DSM 102070
straininfo link
- @ref: 89412
- straininfo: 399809
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Biotechnology | 23892752 | Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology. | Baumgart M, Unthan S, Ruckert C, Sivalingam J, Grunberger A, Kalinowski J, Bott M, Noack S, Frunzke J | Appl Environ Microbiol | 10.1128/AEM.01634-13 | 2013 | Bacterial Proteins/biosynthesis, Biotechnology/*methods, Corynebacterium glutamicum/*genetics/*virology, DNA Restriction-Modification Enzymes, DNA, Bacterial/chemistry/genetics, Gene Dosage, Genetics, Microbial/*methods, Genomic Instability, Luminescent Proteins/biosynthesis, Microbial Viability, Molecular Sequence Data, Plasmids, Prophages/*genetics, Recombinant Proteins/biosynthesis, SOS Response, Genetics, Sequence Analysis, DNA, *Sequence Deletion, Transformation, Bacterial | Genetics |
| Metabolism | 25488698 | A chromosomally encoded T7 RNA polymerase-dependent gene expression system for Corynebacterium glutamicum: construction and comparative evaluation at the single-cell level. | Kortmann M, Kuhl V, Klaffl S, Bott M | Microb Biotechnol | 10.1111/1751-7915.12236 | 2014 | Bacterial Proteins/analysis/genetics, Chromosomes, Bacterial, Corynebacterium glutamicum/*enzymology/*genetics, DNA-Directed RNA Polymerases/*genetics/*metabolism, Flow Cytometry, Fluorometry, Gene Expression Regulation, Bacterial/*drug effects, Genes, Reporter, Isopropyl Thiogalactoside/*metabolism, Luminescent Proteins/analysis/genetics, Pyruvate Kinase/analysis/genetics, Recombinant Proteins/genetics/metabolism, Recombination, Genetic, Viral Proteins/*genetics/*metabolism | Enzymology |
| Genetics | 29196644 | Adaptive laboratory evolution of Corynebacterium glutamicum towards higher growth rates on glucose minimal medium. | Pfeifer E, Gatgens C, Polen T, Frunzke J | Sci Rep | 10.1038/s41598-017-17014-9 | 2017 | *Adaptation, Physiological, Bacterial Proteins, Corynebacterium glutamicum/genetics/*growth & development/virology, Culture Media/*chemistry, Gene Rearrangement, Genetic Fitness, Genome, Bacterial, Glucose/*metabolism, Mutation Rate, Prophages/physiology, Whole Genome Sequencing | Cultivation |
| Genetics | 33802915 | Genome Sequence of the Bacteriophage CL31 and Interaction with the Host Strain Corynebacterium glutamicum ATCC 13032. | Hunnefeld M, Viets U, Sharma V, Wirtz A, Hardy A, Frunzke J | Viruses | 10.3390/v13030495 | 2021 | *Bacteriophages/genetics/physiology, Base Sequence, Corynebacterium glutamicum/*virology, DNA, Viral, *Genome, Viral, Host Microbial Interactions | Pathogenicity |
| Pathogenicity | 34224896 | Metabolic engineering of Corynebacterium glutamicum for production of scyllo-inositol, a drug candidate against Alzheimer's disease. | Ramp P, Lehnert A, Matamouros S, Wirtz A, Baumgart M, Bott M | Metab Eng | 10.1016/j.ymben.2021.06.011 | 2021 | *Alzheimer Disease/drug therapy/genetics, Bacillus subtilis/genetics, *Corynebacterium glutamicum/genetics, Humans, Inositol, Metabolic Engineering, *Pharmaceutical Preparations | Biotechnology |
| 34976962 | Construction of an IS-Free Corynebacterium glutamicum ATCC 13 032 Chassis Strain and Random Mutagenesis Using the Endogenous ISCg1 Transposase. | Linder M, Haak M, Botes A, Kalinowski J, Ruckert C | Front Bioeng Biotechnol | 10.3389/fbioe.2021.751334 | 2021 | |||
| Metabolism | 36178056 | High-level recombinant protein production with Corynebacterium glutamicum using acetate as carbon source. | Kiefer D, Tadele LR, Lilge L, Henkel M, Hausmann R | Microb Biotechnol | 10.1111/1751-7915.14138 | 2022 | *Corynebacterium glutamicum, Carbon/metabolism, Recombinant Proteins/metabolism, Biotechnology/methods, Acetates/metabolism | Biotechnology |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22227 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102070 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102070) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 89412 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399809.1 |