Strain identifier
BacDive ID: 130898
Type strain: 
Species: Campylobacter coli
Strain Designation: CNET068, R381
Strain history: <- F. van der Wal, Animal Sciences Group, Wageningen UR, Lelystad, Netherlands; CNET068 <- R. H. Madden, Agri-Food and Biosciences Institute, Belfast, Northern Ireland; R381
NCBI tax ID(s): 195 (species)
General
@ref: 22818
BacDive-ID: 130898
DSM-Number: 24190
keywords: Bacteria, microaerophile, mesophilic
description: Campylobacter coli CNET068 is a microaerophile, mesophilic bacterium that was isolated from pig.
NCBI tax id
- NCBI tax id: 195
- Matching level: species
strain history
- @ref: 22818
- history: <- F. van der Wal, Animal Sciences Group, Wageningen UR, Lelystad, Netherlands; CNET068 <- R. H. Madden, Agri-Food and Biosciences Institute, Belfast, Northern Ireland; R381
doi: 10.13145/bacdive130898.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Campylobacteraceae
- genus: Campylobacter
- species: Campylobacter coli
- full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973 (Approved Lists 1980)
synonyms
@ref synonym 20215 Vibrio coli 20215 Campylobacter hyoilei
@ref: 22818
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Campylobacteraceae
genus: Campylobacter
species: Campylobacter coli
full scientific name: Campylobacter coli (Doyle 1948) Véron and Chatelain 1973
strain designation: CNET068, R381
type strain: no
Morphology
colony morphology
- @ref: 22818
- incubation period: 1-2 days
Culture and growth conditions
culture medium
- @ref: 22818
- name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)
- growth: yes
- link: https://mediadive.dsmz.de/medium/693
- composition: Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
culture temp
- @ref: 22818
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 22818
- oxygen tolerance: microaerophile
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68373 | 16199 | urea | - | hydrolysis |
| 68373 | 17632 | nitrate | + | reduction |
| 68373 | 606565 | hippurate | - | hydrolysis |
| 68373 | 78019 | triphenyltetrazolium chloride | + | reduction |
| 68373 | 17634 | D-glucose | + | assimilation |
| 68373 | 30031 | succinate | + | assimilation |
| 68373 | 30089 | acetate | - | assimilation |
| 68373 | 17272 | propionate | + | assimilation |
| 68373 | 25115 | malate | - | assimilation |
| 68373 | 16947 | citrate | - | assimilation |
antibiotic resistance
| @ref | ChEBI | metabolite | is antibiotic | is sensitive | sensitivity conc. |
|---|---|---|---|---|---|
| 68373 | 48923 | erythromycin | yes | yes | 14 µg |
| 68373 | 474053 | cefazolin | yes | yes | 224 µg |
| 68373 | 100147 | nalidixic acid | yes | yes | 84 µg |
metabolite production
- @ref: 68373
- Chebi-ID: 16136
- metabolite: hydrogen sulfide
- production: no
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68373 | catalase | + | 1.11.1.6 |
| 68373 | alkaline phosphatase | + | 3.1.3.1 |
| 68373 | L-aspartate arylamidase | - | 3.4.11.21 |
| 68373 | L-arginine arylamidase | + | |
| 68373 | pyrrolidonyl arylamidase | + | 3.4.19.3 |
| 68373 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68373 | esterase | + | |
| 68373 | urease | - | 3.5.1.5 |
API CAM
| @ref | URE | NIT | EST | HIP | GGT | TTC | PYRA | ArgA | AspA | PAL | H2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | ERO | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22818 | - | + | + | - | - | + | + | + | - | + | - | + | + | - | - | - | + | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 22818
- sample type: pig
- geographic location: Northern Ireland
- country: United Kingdom
- origin.country: GBR
- continent: Europe
isolation source categories
- Cat1: #Host
- Cat2: #Mammals
- Cat3: #Suidae (Pig,Swine)
Safety information
risk assessment
- @ref: 22818
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 22818
culture collection no.: DSM 24190
straininfo link
- @ref: 89379
- straininfo: 401588
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22818 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24190 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24190) | |
| 68373 | Automatically annotated from API CAM | |||
| 89379 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401588.1 |