Strain identifier
BacDive ID: 130751
Type strain: 
Species: Vibrio alginolyticus
Strain Designation: RA12
Strain history: <- C. Simon Colin, Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Centre de Brest, Plouzané, France; RA12 <- G. Raguenes, IFREMER, Plouzané <- B. Costa, Pacific Biotech, Tahiti, French Polynesia
NCBI tax ID(s): 663 (species)
General
@ref: 21532
BacDive-ID: 130751
DSM-Number: 22754
keywords: 16S sequence, Bacteria, mesophilic, polysaccharide production
description: Vibrio alginolyticus RA12 is a mesophilic bacterium that produces polysaccharides and was isolated from benthic microbial mat.
NCBI tax id
- NCBI tax id: 663
- Matching level: species
strain history
- @ref: 21532
- history: <- C. Simon Colin, Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Centre de Brest, Plouzané, France; RA12 <- G. Raguenes, IFREMER, Plouzané <- B. Costa, Pacific Biotech, Tahiti, French Polynesia
doi: 10.13145/bacdive130751.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio alginolyticus
- full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968 (Approved Lists 1980)
synonyms
@ref synonym 20215 Beneckea alginolytica 20215 Oceanomonas alginolytica
@ref: 21532
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales, not validated
family: Vibrionaceae
genus: Vibrio
species: Vibrio alginolyticus
full scientific name: Vibrio alginolyticus (Miyamoto et al. 1961) Sakazaki 1968
strain designation: RA12
type strain: no
Culture and growth conditions
culture medium
- @ref: 21532
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 21532
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 21532 | extracellular polysaccharides |
| 21532 | poly(ß-hydroxybutyric acid) |
Isolation, sampling and environmental information
isolation
- @ref: 21532
- sample type: benthic microbial mat
- geographic location: atoll of Rangiroa
- country: French Polynesia
- origin.country: PYF
- continent: Australia and Oceania
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Tidal flat |
| #Host | #Microbial |
Safety information
risk assessment
- @ref: 21532
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21532
- description: Vibrio sp. RA12 partial 16S rRNA gene, isolate RA12
- accession: AM989484
- length: 1427
- database: ena
- NCBI tax ID: 522256
External links
@ref: 21532
culture collection no.: DSM 22754
straininfo link
- @ref: 89248
- straininfo: 407975
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21532 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22754 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22754) | |
| 89248 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407975.1 |