Strain identifier
BacDive ID: 130514
Type strain: 
Species: Paenibacillus gorillae
Strain Designation: G1
Strain history: <- F. Bittar, URMITE, 27 bd Jean Moulin, 13385 Marseille Cedex 05, France <- M.B. Keita
NCBI tax ID(s): 1243662 (species)
General
@ref: 21716
BacDive-ID: 130514
DSM-Number: 26181
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Paenibacillus gorillae G1 is a mesophilic bacterium that was isolated from gorilla, stool sample.
NCBI tax id
- NCBI tax id: 1243662
- Matching level: species
strain history
- @ref: 21716
- history: <- F. Bittar, URMITE, 27 bd Jean Moulin, 13385 Marseille Cedex 05, France <- M.B. Keita
doi: 10.13145/bacdive130514.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus gorillae
- full scientific name: Paenibacillus gorillae Keita et al. 2014
@ref: 21716
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus gorillae
full scientific name: Paenibacillus gorillae Keita et al. 2014
strain designation: G1
type strain: yes
Morphology
colony morphology
- @ref: 21716
- incubation period: 3-7 days
Culture and growth conditions
culture medium
- @ref: 21716
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://mediadive.dsmz.de/medium/92
- composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
culture temp
- @ref: 21716
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21716
- sample type: gorilla, stool sample
- geographic location: Minton, south-central part of the DJA FAUNAL Park
- country: Cameroon
- origin.country: CMR
- continent: Africa
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Primates |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
taxonmaps
- @ref: 69479
- File name: preview.99_3129.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_713;97_833;98_969;99_3129&stattab=map
- Last taxonomy: Paenibacillus
- 16S sequence: JX650054
- Sequence Identity:
- Total samples: 455
- soil counts: 276
- aquatic counts: 18
- animal counts: 68
- plant counts: 93
Sequence information
16S sequences
- @ref: 21716
- description: Paenibacillus gorillae strain G1 16S ribosomal RNA gene, partial sequence
- accession: JX650054
- length: 1516
- database: ena
- NCBI tax ID: 1243662
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Paenibacillus gorillae G1 | GCA_000513275 | contig | ncbi | 1243662 |
| 66792 | Paenibacillus gorillae G1 | 2600255094 | draft | img | 1243662 |
GC content
- @ref: 21716
- GC-content: 48.8
- method: sequence analysis
External links
@ref: 21716
culture collection no.: DSM 26181, CSUR P205
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21716 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26181 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26181) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |