Strain identifier

BacDive ID: 130441

Type strain: No

Species: Catellatospora aurea

Strain Designation: NEAU-SH16

Strain history: <- C. Liu, School of Life Science, Harbin, China; NEAU-SH16

NCBI tax ID(s): 1337874 (species)

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General

@ref: 21545

BacDive-ID: 130441

DSM-Number: 46719

keywords: 16S sequence, Bacteria, mesophilic

description: Catellatospora aurea NEAU-SH16 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1337874
  • Matching level: species

strain history

  • @ref: 21545
  • history: <- C. Liu, School of Life Science, Harbin, China; NEAU-SH16

doi: 10.13145/bacdive130441.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micromonosporales
  • family: Micromonosporaceae
  • genus: Catellatospora
  • species: Catellatospora aurea
  • full scientific name: Catellatospora aurea Liu et al. 2014

@ref: 21545

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micromonosporaceae

genus: Catellatospora

species: Catellatospora aurea

full scientific name: Catellatospora aurea

strain designation: NEAU-SH16

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
21545ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf
21545GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 21545
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 21545
  • sample type: soil
  • geographic location: Shanghai, Wusong river
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_186464.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_94;96_3745;97_11741;98_14429;99_186464&stattab=map
  • Last taxonomy: Catellatospora aurea
  • 16S sequence: KF000001
  • Sequence Identity:
  • Total samples: 1350
  • soil counts: 894
  • aquatic counts: 294
  • animal counts: 74
  • plant counts: 88

Sequence information

16S sequences

  • @ref: 21545
  • description: Catellatospora aurea strain NEAU-SH16 16S ribosomal RNA gene, partial sequence
  • accession: KF000001
  • length: 1520
  • database: ena
  • NCBI tax ID: 1337874

GC content

  • @ref: 21545
  • GC-content: 71.1

External links

@ref: 21545

culture collection no.: DSM 46719, CGMCC 4.7147

literature

  • topic: Phylogeny
  • Pubmed-ID: 25261080
  • title: Catellatospora aurea sp. nov., a novel actinomycete isolated from soil.
  • authors: Liu C, Zhao J, Guan X, Li L, Li W, Wang X, Xiang W
  • journal: Antonie Van Leeuwenhoek
  • DOI: 10.1007/s10482-014-0287-0
  • year: 2014
  • mesh: Bacterial Typing Techniques, China, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Micromonosporaceae/*classification/genetics/*isolation & purification/physiology, Microscopy, Electron, Scanning, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
21545Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-46719Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46719)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/