Strain identifier
BacDive ID: 130418
Type strain: 
Species: Arthrobacter sp.
Strain Designation: UPD6
Strain history: <- J.C. Thomas, Univ. Michigan, USA; UPD 6 <- E. Susilawati, Univ. Michigan
NCBI tax ID(s): 1667 (species)
version 8.1 (current version)
General
@ref: 21479
BacDive-ID: 130418
DSM-Number: 24033
keywords: 16S sequence, Bacteria, mesophilic
description: Arthrobacter sp. UPD6 is a mesophilic bacterium that was isolated from PAH contaminated soils.
NCBI tax id
- NCBI tax id: 1667
- Matching level: species
strain history
- @ref: 21479
- history: <- J.C. Thomas, Univ. Michigan, USA; UPD 6 <- E. Susilawati, Univ. Michigan
doi: 10.13145/bacdive130418.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Arthrobacter
- species: Arthrobacter sp.
- full scientific name: Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)
@ref: 21479
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micrococcaceae
genus: Arthrobacter
species: Arthrobacter sp.
full scientific name: Arthrobacter sp.
strain designation: UPD6
type strain: no
Culture and growth conditions
culture medium
- @ref: 21479
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 21479
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21479
- sample type: PAH contaminated soils
- geographic location: Dearborn, MI
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Contamination | |
| #Environmental | #Terrestrial | #Soil |
Sequence information
16S sequences
- @ref: 21479
- description: Arthrobacter sp. UPD 6 16S ribosomal RNA gene, partial sequence
- accession: GU973892
- length: 785
- database: ena
- NCBI tax ID: 756330
External links
@ref: 21479
culture collection no.: DSM 24033
straininfo link
- @ref: 88950
- straininfo: 397124
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21479 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24033 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24033) | |
| 88950 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397124.1 |