Strain identifier
BacDive ID: 130357
Type strain: 
Species: Intrasporangium calvum
Strain Designation: 4LS1
Strain history: <- S. Green, Oceanography Dept., Florida State Univ., Tallahassee, USA; 4LS1 <- O. Prakash,
NCBI tax ID(s): 53358 (species)
General
@ref: 21604
BacDive-ID: 130357
DSM-Number: 23577
keywords: 16S sequence, Bacteria
description: Intrasporangium calvum 4LS1 is a bacterium that was isolated from contaminated subsurface sediment.
NCBI tax id
- NCBI tax id: 53358
- Matching level: species
strain history
- @ref: 21604
- history: <- S. Green, Oceanography Dept., Florida State Univ., Tallahassee, USA; 4LS1 <- O. Prakash,
doi: 10.13145/bacdive130357.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Intrasporangiaceae
- genus: Intrasporangium
- species: Intrasporangium calvum
- full scientific name: Intrasporangium calvum Kalakoutskii et al. 1967 (Approved Lists 1980)
@ref: 21604
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Intrasporangiaceae
genus: Intrasporangium
species: Intrasporangium calvum
full scientific name: Intrasporangium calvum Kalakoutskii et al. 1967 emend. Yang et al. 2012 emend. Nouioui et al. 2018
strain designation: 4LS1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 21604 | BHI MEDIUM (DSMZ Medium 215) | yes | https://mediadive.dsmz.de/medium/215 | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water |
| 21604 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf |
culture temp
- @ref: 21604
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 21604
- sample type: contaminated subsurface sediment
- geographic location: Tennessee (TN), Oak Ridge
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Contamination | |
| #Environmental | #Terrestrial | #Geologic |
| #Environmental | #Terrestrial | #Sediment |
Safety information
risk assessment
- @ref: 21604
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21604
- description: Intrasporangium sp. 4LS1 16S ribosomal RNA gene, partial sequence
- accession: FJ851442
- length: 806
- database: nuccore
- NCBI tax ID: 693011
External links
@ref: 21604
culture collection no.: DSM 23577
straininfo link
- @ref: 88889
- straininfo: 397042
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21604 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23577 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23577) | |
| 88889 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397042.1 |