Strain identifier
BacDive ID: 130352
Type strain: 
Species: Halomonas qiaohouensis
Strain history: <- W. Xiao, YIM; YIM-QH88
NCBI tax ID(s): 1329370 (species)
version 8.1 (current version)
General
@ref: 21898
BacDive-ID: 130352
DSM-Number: 26770
keywords: 16S sequence, Bacteria, mesophilic
description: Halomonas qiaohouensis DSM 26770 is a mesophilic bacterium that was isolated from salt mine soil from a tunnel wall.
NCBI tax id
- NCBI tax id: 1329370
- Matching level: species
strain history
- @ref: 21898
- history: <- W. Xiao, YIM; YIM-QH88
doi: 10.13145/bacdive130352.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Oceanospirillales
- family: Halomonadaceae
- genus: Halomonas
- species: Halomonas qiaohouensis
- full scientific name: Halomonas qiaohouensis Wang et al. 2015
synonyms
- @ref: 20215
- synonym: Franzmannia qiaohouensis
@ref: 21898
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Oceanospirillales
family: Halomonadaceae
genus: Halomonas
species: Halomonas qiaohouensis
full scientific name: Halomonas qiaohouensis Wang et al. 2015
type strain: yes
Culture and growth conditions
culture medium
- @ref: 21898
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 21898
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 21898
- sample type: salt mine soil from a tunnel wall
- geographic location: Yunnan Province, Qiaohou salt mine
- country: China
- origin.country: CHN
- continent: Asia
- latitude: 26.1667
- longitude: 100.283
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Built environment | |
| #Engineered | #Other | #Mine |
| #Environmental | #Terrestrial | #Soil |
| #Condition | #Saline |
taxonmaps
- @ref: 69479
- File name: preview.99_52474.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_48;96_2908;97_3577;98_37613;99_52474&stattab=map
- Last taxonomy: Halomonas qiaohouensis subclade
- 16S sequence: KC237714
- Sequence Identity:
- Total samples: 614
- soil counts: 7
- aquatic counts: 22
- animal counts: 582
- plant counts: 3
Safety information
risk assessment
- @ref: 21898
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 21898
- description: Halomonas qiaohouensis strain YIM QH88 16S ribosomal RNA gene, partial sequence
- accession: KC237714
- length: 1506
- database: ena
- NCBI tax ID: 1329370
GC content
- @ref: 21898
- GC-content: 64.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 21898
culture collection no.: DSM 26770, CCTCC AB 2012965, YIM QH88
straininfo link
- @ref: 88884
- straininfo: 403230
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 24855014 | Halomonas qiaohouensis sp. nov., isolated from salt mine soil in southwest China. | Wang YX, Xiao W, Dong MH, Zhao Q, Li ZY, Lai YH, Cui XL | Antonie Van Leeuwenhoek | 10.1007/s10482-014-0189-1 | 2014 | Bacterial Typing Techniques, Base Composition, China, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Halomonas/*classification/genetics/*isolation & purification/physiology, Hydrogen-Ion Concentration, Locomotion, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, Pigments, Biological/metabolism, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Salts, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Temperature | Genetics |
| Phylogeny | 34731274 | Halomonas salipaludis sp. nov., isolated from a saline-alkali wetland soil. | Xing J, Gong Q, Tang L, Li J, Fan H, Wang X, Liu H, Zhang G, Zhu J | Arch Microbiol | 10.1007/s00203-021-02560-8 | 2021 | Alkalies, Bacterial Typing Techniques, DNA, Bacterial/genetics, Fatty Acids/analysis, *Halomonas/genetics, Nucleic Acid Hybridization, Phospholipids, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Soil, Wetlands | Transcriptome |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21898 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-26770 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26770) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 88884 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID403230.1 |