Strain identifier
BacDive ID: 130311
Type strain: 
Species: Serratia myotis
Strain Designation: 12
Strain history: CIP <- 2016, DSMZ <- P. Garcia-Fraile, ASCR Inst., Prague, Czech Republic: strain 12 <- J. Pikula, Brno Univ., Brno, Czech Republic
NCBI tax ID(s): 1521427 (species)
General
@ref: 21777
BacDive-ID: 130311
DSM-Number: 28726
keywords: 16S sequence, Bacteria, mesophilic, Gram-negative, motile, rod-shaped
description: Serratia myotis 12 is a mesophilic, Gram-negative, motile bacterium that was isolated from rectal swab from a greater mouse-eared bat .
NCBI tax id
- NCBI tax id: 1521427
- Matching level: species
strain history
| @ref | history |
|---|---|
| 21777 | <- P. García-Fraile, Institute of Microbiology ASCR, Lab. of Fungal Genetics and Metabolism, Prague, Czech Republic; 12 <- J. Pikula, University of Veterinary and Pharmaceutical Scs. Brno, Czech Republic |
| 121212 | CIP <- 2016, DSMZ <- P. Garcia-Fraile, ASCR Inst., Prague, Czech Republic: strain 12 <- J. Pikula, Brno Univ., Brno, Czech Republic |
doi: 10.13145/bacdive130311.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Yersiniaceae
- genus: Serratia
- species: Serratia myotis
- full scientific name: Serratia myotis García-Fraile et al. 2015
@ref: 21777
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Yersiniaceae
genus: Serratia
species: Serratia myotis
full scientific name: Serratia myotis García-Fraile et al. 2015
strain designation: 12
type strain: yes
Morphology
cell morphology
- @ref: 121212
- gram stain: negative
- cell shape: rod-shaped
- motility: yes
multimedia
- @ref: 21777
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_28726.jpg
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | composition | link |
|---|---|---|---|---|
| 41641 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 121212 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
- @ref: 41641
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
| @ref | sample type | host species | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|---|
| 21777 | rectal swab from a greater mouse-eared bat (Myotis myotis) | Myotis myotis | Jeseniky mountains, Simon-Judah mine | Czech Republic | CZE | Europe |
| 121212 | Animal, Rectal swab from a greater mouse-eared bat, Myotis myotis | Jeseniky mountains, Simon-Judah mine, Czech Republic | Czech Republic | CZE | Europe |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Patient | #Swab |
| #Host | #Mammals | |
| #Host Body-Site | #Gastrointestinal tract | #Rectum |
Safety information
risk assessment
- @ref: 121212
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
- @ref: 21777
- description: Serratia myotis strain 12 16S ribosomal RNA gene, partial sequence
- accession: KJ739884
- length: 1426
- database: ena
- NCBI tax ID: 1521427
GC content
- @ref: 21777
- GC-content: 52
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 21777
culture collection no.: DSM 28726, CECT 8594, CIP 111010
literature
- topic: Phylogeny
- Pubmed-ID: 25281728
- title: Serratia myotis sp. nov. and Serratia vespertilionis sp. nov., isolated from bats hibernating in caves.
- authors: Garcia-Fraile P, Chudickova M, Benada O, Pikula J, Kolarik M
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.066407-0
- year: 2014
- mesh: Animals, Bacterial Typing Techniques, Base Composition, Caves, Chiroptera/*microbiology, Czech Republic, DNA, Bacterial/genetics, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Serratia/*classification/genetics/isolation & purification
- topic2: Genetics
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 21777 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28726 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28726) | |
| 41641 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/34622 | ||
| 121212 | Curators of the CIP | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20111010 | Collection of Institut Pasteur (CIP 111010) |