Strain identifier
BacDive ID: 130289
Type strain: 
Species: Aquisalimonas halophila
Strain history: <- S.-K. Tang, YIM; YIM 95345 <- Y.-J. Zhang
NCBI tax ID(s): 1303863 (species)
version 8.1 (current version)
General
@ref: 22050
BacDive-ID: 130289
DSM-Number: 25902
keywords: 16S sequence, Bacteria, mesophilic
description: Aquisalimonas halophila DSM 25902 is a mesophilic bacterium that was isolated from soil from a hypersaline mine.
NCBI tax id
- NCBI tax id: 1303863
- Matching level: species
strain history
- @ref: 22050
- history: <- S.-K. Tang, YIM; YIM 95345 <- Y.-J. Zhang
doi: 10.13145/bacdive130289.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Chromatiales
- family: Ectothiorhodospiraceae
- genus: Aquisalimonas
- species: Aquisalimonas halophila
- full scientific name: Aquisalimonas halophila Zhang et al. 2014
@ref: 22050
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Chromatiales
family: Ectothiorhodospiraceae
genus: Aquisalimonas
species: Aquisalimonas halophila
full scientific name: Aquisalimonas halophila Zhang et al. 2014
type strain: yes
Culture and growth conditions
culture medium
- @ref: 22050
- name: AQUISALIMONAS MEDIUM (DSMZ Medium 1452)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1452
- composition: Name: AQUISALIMONAS MEDIUM (DSMZ Medium 1452) Composition: NaCl 100.0 g/l Agar 20.0 g/l Glucose 5.0 g/l Yeast extract 2.0 g/l CaCO3 1.0 g/l Tryptone 0.5 g/l Distilled water
culture temp
- @ref: 22050
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 22050
- sample type: soil from a hypersaline mine
- geographic location: Yunnan province
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Other | #Mine |
| #Environmental | #Terrestrial | #Soil |
| #Condition | #Saline |
taxonmaps
- @ref: 69479
- File name: preview.99_95231.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15363;96_39018;97_49699;98_65360;99_95231&stattab=map
- Last taxonomy: Aquisalimonas
- 16S sequence: KC577145
- Sequence Identity:
- Total samples: 345
- soil counts: 102
- aquatic counts: 192
- animal counts: 49
- plant counts: 2
Safety information
risk assessment
- @ref: 22050
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 22050
- description: Aquisalimonas halophila strain YIM 95345 16S ribosomal RNA gene, partial sequence
- accession: KC577145
- length: 1538
- database: ena
- NCBI tax ID: 1303863
GC content
- @ref: 22050
- GC-content: 59.4
- method: high performance liquid chromatography (HPLC)
External links
@ref: 22050
culture collection no.: DSM 25902, CCTCC AB 2012043, YIM 95345
straininfo link
- @ref: 88824
- straininfo: 394319
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 24699066 | Aquisalimonas halophila sp. nov., a moderately halophilic bacterium isolated from a hypersaline mine. | Zhang YJ, Jia M, Ma YC, Lu KY, Tian F, Klenk HP, Zhou Y, Tang SK | Int J Syst Evol Microbiol | 10.1099/ijs.0.059428-0 | 2014 | Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Gammaproteobacteria/*classification/genetics/isolation & purification, *Mining, Molecular Sequence Data, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Salinity, Sequence Analysis, DNA, *Soil Microbiology, Ubiquinone/chemistry | Genetics |
| Phylogeny | 25667394 | Aquisalimonas lutea sp. nov., a moderately halophilic bacterium from a saltern. | Infante-Dominguez C, Sanchez-Porro C, Ventosa A | Int J Syst Evol Microbiol | 10.1099/ijs.0.000106 | 2015 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Ectothiorhodospiraceae/*classification/genetics/isolation & purification, Fatty Acids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Salinity, Sequence Analysis, DNA, Spain, *Water Microbiology | Genetics |
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 22050 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25902 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25902) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 88824 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID394319.1 |