Strain identifier
BacDive ID: 12801
Type strain: 
Species: Pseudomonas aeruginosa
Strain Designation: PAO1, IC, PA01
Strain history: CIP <- 1994, ATCC <- B.W. Holloway: strain IC <- P. Rountree: strain PA01
NCBI tax ID(s): 1236530 (strain), 287 (species)
version 9.1 (current version)
General
@ref: 16444
BacDive-ID: 12801
DSM-Number: 22644
keywords: genome sequence, 16S sequence, Bacteria, aerobe, Gram-negative, human pathogen
description: Pseudomonas aeruginosa PAO1 is an aerobe, Gram-negative human pathogen that was isolated from infected wound.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 287 | species |
| 1236530 | strain |
strain history
| @ref | history |
|---|---|
| 16444 | <- LMG; LMG 12228 <- ATCC; ATCC 15692 <- B. Holloway; PAO1 <- P. Rountree; |
| 67770 | CIP 104116 <-- ATCC 15692 <-- B. W. Holloway 1C <-- P. Rountree PAO1. |
| 116091 | CIP <- 1994, ATCC <- B.W. Holloway: strain IC <- P. Rountree: strain PA01 |
doi: 10.13145/bacdive12801.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas aeruginosa
- full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium aeruginosum
@ref: 16444
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas aeruginosa
full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900
strain designation: PAO1, IC, PA01
type strain: no
Morphology
cell morphology
| @ref | gram stain | cell shape | motility | confidence |
|---|---|---|---|---|
| 116091 | negative | rod-shaped | yes | |
| 69480 | yes | 91.831 | ||
| 69480 | negative | 97.5 |
colony morphology
- @ref: 60988
- incubation period: 1 day
pigmentation
- @ref: 116091
- production: yes
- name: Pyocyanin
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 16444 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| 16444 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
| 41240 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 116091 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 16444 | positive | growth | 30 |
| 41240 | positive | growth | 30 |
| 60988 | positive | growth | 30-37 |
| 67770 | positive | growth | 30 |
| 116091 | positive | growth | 30-45 |
| 116091 | no | growth | 5 |
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 60988 | aerobe | |
| 116091 | obligate aerobe | |
| 69480 | aerobe | 94.797 |
spore formation
- @ref: 69481
- spore formation: no
- confidence: 96
compound production
- @ref: 16444
- compound: pyochelin
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | + | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | + | assimilation |
| 68369 | 16899 | D-mannitol | + | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | + | hydrolysis |
| 68369 | 29016 | arginine | + | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 116091 | 16947 | citrate | + | carbon source |
| 116091 | 17632 | nitrate | + | reduction |
| 116091 | 16301 | nitrite | + | reduction |
antibiotic resistance
- @ref: 116091
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite production
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 68369 | 35581 | indole | no |
| 67770 | 29669 | pyochelin | yes |
| 67770 | 8653 | pyocyanine | yes |
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | + | |
| 68369 | arginine dihydrolase | + | 3.5.3.6 |
| 116091 | oxidase | + | |
| 116091 | beta-galactosidase | - | 3.2.1.23 |
| 116091 | alcohol dehydrogenase | + | 1.1.1.1 |
| 116091 | gelatinase | + | |
| 116091 | amylase | - | |
| 116091 | caseinase | + | 3.4.21.50 |
| 116091 | catalase | + | 1.11.1.6 |
| 116091 | tween esterase | - | |
| 116091 | lecithinase | - | |
| 116091 | lysine decarboxylase | - | 4.1.1.18 |
| 116091 | ornithine decarboxylase | - | 4.1.1.17 |
fatty acid profile
fatty acids
@ref fatty acid percentage ECL 60988 C12:0 5.9 12 60988 C14:0 0.8 14 60988 C16:0 19.5 16 60988 C10:0 3OH 7 11.423 60988 C12:0 2OH 8.6 13.178 60988 C12:0 3OH 7 13.455 60988 C16:1 ω7c 18.5 15.819 60988 C17:0 CYCLO 1 16.888 60988 C18:1 ω7c /12t/9t 25.3 17.824 60988 C19:0 CYCLO ω8c 0.6 18.9 60988 Unidentified 0.7 9.981 60988 Unidentified 0.6 10.468 60988 Unidentified 1 10.659 60988 Unidentified 0.6 12.348 60988 Unidentified 1.6 16.297 60988 Unidentified 1.5 18.144 - type of FA analysis: whole cell analysis
- method/protocol: CCUG
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16444 | - | - | - | + | +/- | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
| 16444 | - | - | - | + | + | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
| 16444 | - | - | - | + | + | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
| 16444 | + | - | - | + | + | + | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
| 60988 | + | - | - | + | - | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
| 16444 | + | - | - | + | + | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
| 16444 | - | - | - | + | +/- | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
API biotype100
| @ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116091 | + | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | + | - | - | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | - | + | - | - | + | - | - | - | + | - | + | + | + | + | - | + | - | - | - | + | + | + | + | + | + | + | - | + | + | + | + | + | + | - | - | + | + | + | + | + | + | + | + | + | + | + | + |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | latitude | longitude |
|---|---|---|---|---|---|---|---|
| 16444 | infected wound | Melbourne | Australia | AUS | Australia and Oceania | -37.8409 | 144.947 |
| 60988 | Human wound | ||||||
| 67770 | Infected wound | ||||||
| 116091 | Human, Infected wound |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Disease | |
| #Host Body-Site | #Other | #Wound |
taxonmaps
- @ref: 69479
- File name: preview.99_42.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_36;97_37;98_40;99_42&stattab=map
- Last taxonomy: Pseudomonas aeruginosa
- 16S sequence: AB626118
- Sequence Identity:
- Total samples: 22757
- soil counts: 1669
- aquatic counts: 5046
- animal counts: 14748
- plant counts: 1294
Safety information
risk assessment
| @ref | pathogenicity human | pathogenicity animal | biosafety level | biosafety level comment |
|---|---|---|---|---|
| 16444 | yes | yes | 2 | Risk group (German classification) |
| 116091 | 2 | Risk group (French classification) |
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Pseudomonas aeruginosa gene for 16S rRNA, partial sequence, strain: JCM 14847 | AB626118 | 1458 | nuccore | 287 |
| 67770 | Pseudomonas aeruginosa strain ATCC 15692 16S ribosomal RNA gene, partial sequence | AF094715 | 1448 | nuccore | 287 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Pseudomonas aeruginosa ATCC 15692 | GCA_001729505 | complete | ncbi | 287 |
| 66792 | Pseudomonas aeruginosa JCM 14847 | GCA_000615565 | contig | ncbi | 1236530 |
| 66792 | Pseudomonas aeruginosa JCM 14847 | 1236530.3 | wgs | patric | 1236530 |
| 66792 | Pseudomonas aeruginosa strain ATCC 15692 | 287.2908 | complete | patric | 287 |
| 66792 | Pseudomonas aeruginosa strain DVT402 | 287.11535 | wgs | patric | 287 |
| 66792 | Pseudomonas aeruginosa JCM 14847 | 2609460090 | draft | img | 1236530 |
| 66792 | Pseudomonas aeruginosa ATCC 15692 | 2721755590 | complete | img | 287 |
| 67770 | Pseudomonas aeruginosa PAO1 | GCA_000006765 | complete | ncbi | 208964 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 96 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.5 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 98.332 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 94.797 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 87.45 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 100 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | yes | 91.831 | no |
External links
@ref: 16444
culture collection no.: DSM 22644, ATCC 15692, CIP 104116, JCM 14847, LMG 12228, CCUG 56489, KCTC 1637, ATCC 17503, ATCC 25247, ATCC 25375, BCRC 13078, CECT 4122, LMG 27638, NCCB 4163, NCIMB 10545, NCIMB 10548, VTT E-082794, VTT E-84219
straininfo link
- @ref: 82011
- straininfo: 13749
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Metabolism | 1322952 | Exogenous siderophore-mediated iron uptake in Pseudomonas aeruginosa: possible involvement of porin OprF in iron translocation. | Meyer JM | J Gen Microbiol | 10.1099/00221287-138-5-951 | 1992 | Bacterial Outer Membrane Proteins/*metabolism, Biological Transport, Active, Cell Division/drug effects, Iron/*metabolism, Iron Chelating Agents/*metabolism/pharmacology, Iron Radioisotopes, Porins, Pseudomonas aeruginosa/*metabolism, Siderophores | Pathogenicity |
| Enzymology | 2125501 | Bacterial siderophores: structures of pyoverdins Pt, siderophores of Pseudomonas tolaasii NCPPB 2192, and pyoverdins Pf, siderophores of Pseudomonas fluorescens CCM 2798. Identification of an unusual natural amino acid. | Demange P, Bateman A, Mertz C, Dell A, Piemont Y, Abdallah MA | Biochemistry | 10.1021/bi00502a005 | 1990 | Amino Acid Sequence, Chromatography, High Pressure Liquid, Circular Dichroism, Iron/analysis, Magnetic Resonance Spectroscopy, Molecular Sequence Data, *Oligopeptides, Peptides/*isolation & purification, Peptides, Cyclic/isolation & purification, Pigments, Biological/*chemistry/isolation & purification, Protein Conformation, Pseudomonas/*analysis/growth & development, Pseudomonas fluorescens/*analysis, Spectrometry, Mass, Fast Atom Bombardment | Phylogeny |
| Enzymology | 2496759 | Selection and characterization of a mutant of the cloned gene for mandelate racemase that confers resistance to an affinity label by greatly enhanced production of enzyme. | Tsou AY, Ransom SC, Gerlt JA, Powers VM, Kenyon GL | Biochemistry | 10.1021/bi00429a008 | 1989 | Affinity Labels/*metabolism, *Cloning, Molecular, Drug Resistance, Microbial/genetics, *Genes, *Genes, Bacterial, Isomerases/*genetics, Mandelic Acids/*metabolism, *Mutation, Phenylpropionates/*metabolism/pharmacology, Pseudomonas/enzymology/*genetics, Pseudomonas aeruginosa/enzymology/*genetics/growth & development, Racemases and Epimerases/*genetics/isolation & purification/metabolism, Recombinant Proteins/isolation & purification/metabolism | Metabolism |
| Enzymology | 2831968 | Cloning, DNA sequence analysis, and expression in Escherichia coli of the gene for mandelate racemase from Pseudomonas putida. | Ransom SC, Gerlt JA, Powers VM, Kenyon GL | Biochemistry | 10.1021/bi00402a006 | 1988 | Amino Acid Sequence, Base Sequence, *Cloning, Molecular, DNA Restriction Enzymes, DNA, Bacterial/*genetics, Escherichia coli/genetics, *Genes, *Genes, Bacterial, Isomerases/*genetics, Molecular Sequence Data, Plasmids, Pseudomonas/enzymology/*genetics, Racemases and Epimerases/*genetics, *Transcription, Genetic | Genetics |
| Pathogenicity | 8023323 | The effect of anti-exotoxin A on the adherence of Pseudomonas aeruginosa to hamster tracheal epithelial cells in vitro. | Moller PC, Evans MJ, Fader RC, Henson LC, Rogers B, Heggers JP | Tissue Cell | 10.1016/0040-8166(94)90093-0 | 1994 | *ADP Ribose Transferases, Animals, Antibodies, Monoclonal, Bacterial Adhesion/*immunology, Bacterial Toxins/*immunology, Cells, Cultured, Cricetinae, Epithelial Cells, Exotoxins/*immunology, Pseudomonas aeruginosa/*physiology, Trachea/*cytology, *Virulence Factors | |
| Enzymology | 8106324 | Cloning and nucleotide sequence of the pvdA gene encoding the pyoverdin biosynthetic enzyme L-ornithine N5-oxygenase in Pseudomonas aeruginosa. | Visca P, Ciervo A, Orsi N | J Bacteriol | 10.1128/jb.176.4.1128-1140.1994 | 1994 | Amino Acid Sequence, Base Sequence, Chromosome Mapping, Cloning, Molecular, Cosmids, Gene Library, Genes, Bacterial/*genetics, Genetic Complementation Test, Humans, Hydroxamic Acids/metabolism, Infant, Newborn, Mixed Function Oxygenases/biosynthesis/*genetics, Molecular Sequence Data, Mutagenesis, Insertional, *Oligopeptides, Pigments, Biological/*biosynthesis, Pseudomonas/genetics, Pseudomonas aeruginosa/enzymology/*genetics, Recombinant Proteins/biosynthesis, Sequence Analysis, DNA, Sequence Homology, Amino Acid | Pathogenicity |
| Enzymology | 8363709 | Pseudoverdin, a compound related to the pyoverdin chromophore from a Pseudomonas aeruginosa strain incapable to produce pyoverdins. | Longerich I, Taraz K, Budzikiewicz H, Tsai L, Meyer JM | Z Naturforsch C J Biosci | 10.1515/znc-1993-5-605 | 1993 | Chromatography, High Pressure Liquid, Magnetic Resonance Spectroscopy, Mass Spectrometry, Molecular Structure, *Oligopeptides, *Pigments, Biological, Pseudomonas aeruginosa/*chemistry, Spectrophotometry, Umbelliferones/*chemistry/isolation & purification | Phylogeny |
| Pathogenicity | 8550201 | Pyoverdin is essential for virulence of Pseudomonas aeruginosa. | Meyer JM, Neely A, Stintzi A, Georges C, Holder IA | Infect Immun | 10.1128/iai.64.2.518-523.1996 | 1996 | Animals, Humans, Iron/metabolism, Mice, *Oligopeptides, Pigments, Biological/*physiology, Pseudomonas aeruginosa/growth & development/*pathogenicity, Siderophores/*physiology, Transferrin/pharmacology, Virulence | Metabolism |
| Metabolism | 8836431 | Degradation of pyrimidine ribonucleosides by Pseudomonas aeruginosa. | West TP | Antonie Van Leeuwenhoek | 10.1007/BF00399622 | 1996 | Ammonium Sulfate/metabolism/pharmacology, Cell Division, Chromatography, Thin Layer, Cytosine Deaminase, Glucose/metabolism, N-Glycosyl Hydrolases/metabolism, Nucleoside Deaminases/metabolism, Pseudomonas aeruginosa/*metabolism, Pyrimidines/*metabolism, Ribonucleosides/analysis/*metabolism | |
| Metabolism | 8914995 | Specific photoaffinity labelling of a ferripyoverdin outer membrane receptor of Pseudomonas aeruginosa. | Ocaktan A, Schalk I, Hennard C, Linget-Morice C, Kyslik P, Smith AW, Lambert PA, Abdallah MA | FEBS Lett | 10.1016/0014-5793(96)01071-x | 1996 | Affinity Labels/*chemical synthesis/chemistry/metabolism, Azides/*chemical synthesis/chemistry/metabolism, Bacterial Outer Membrane Proteins/*analysis/metabolism, Electrophoresis, Polyacrylamide Gel, Ion Transport, Iron/metabolism, Kinetics, *Oligopeptides, Pigments, Biological/*chemical synthesis/chemistry/metabolism, Pseudomonas aeruginosa/*chemistry/metabolism, Siderophores/*chemical synthesis/chemistry/metabolism, Ultraviolet Rays | Enzymology |
| Metabolism | 9245831 | Iron acquisition from transferrin and lactoferrin by Pseudomonas aeruginosa pyoverdin. | Jeong BC, Hawes C, Bonthrone KM, Macaskie LE | Microbiology (Reading) | 10.1099/00221287-143-7-2509 | 1997 | Fluorescence, Hydrogen-Ion Concentration, Iron/*metabolism, Lactoferrin/*metabolism, *Oligopeptides, Pigments, Biological/*metabolism, Pseudomonas aeruginosa/growth & development/*metabolism, Transferrin/*metabolism | |
| Pathogenicity | 9721664 | Pyrithione biocides as inhibitors of bacterial ATP synthesis. | Dinning AJ, Al-Adham IS, Eastwood IM, Austin P, Collier PJ | J Appl Microbiol | 10.1046/j.1365-2672.1998.00478.x | 1998 | Adenosine Triphosphate/*biosynthesis, Antifungal Agents/*pharmacology, Escherichia coli/drug effects/metabolism, Microbial Sensitivity Tests, Organometallic Compounds/*pharmacology, Pseudomonas aeruginosa/drug effects/metabolism, Pyridines/*pharmacology, Thiones, Time Factors | Metabolism |
| Metabolism | 9919663 | The ferripyoverdine receptor FpvA of Pseudomonas aeruginosa PAO1 recognizes the ferripyoverdines of P. aeruginosa PAO1 and P. fluorescens ATCC 13525. | Meyer JM, Stintzi A, Poole K | FEMS Microbiol Lett | 10.1111/j.1574-6968.1999.tb13367.x | 1999 | Bacterial Outer Membrane Proteins/genetics/*metabolism, Genetic Complementation Test, Iron/*metabolism, *Oligopeptides, Phenols/metabolism, Pigments, Biological/chemistry/*metabolism, Pseudomonas aeruginosa/genetics/*metabolism, Pseudomonas fluorescens/genetics/*metabolism, Siderophores/metabolism, *Thiazoles, Time Factors | |
| Metabolism | 10919812 | Degradation of triphenyltin by a fluorescent pseudomonad. | Inoue H, Takimura O, Fuse H, Murakami K, Kamimura K, Yamaoka Y | Appl Environ Microbiol | 10.1128/AEM.66.8.3492-3498.2000 | 2000 | Biodegradation, Environmental, Culture Media, *Fluorescence, Geologic Sediments/microbiology, Organotin Compounds/*metabolism, Pseudomonas/classification/isolation & purification/*metabolism, Soil Microbiology | Cultivation |
| Enzymology | 12440741 | Diastereomeric pyoverdin-chromium(III) complexes. | Budzikiewicz H, Georgias H, Taraz K | Z Naturforsch C J Biosci | 10.1515/znc-2002-9-1034 | 2002 | Bacterial Proteins/chemistry/isolation & purification, Chelating Agents, Chromium/*chemistry, Models, Molecular, Molecular Conformation, *Oligopeptides, Pigments, Biological/*chemistry/isolation & purification, Pseudomonas aeruginosa/chemistry, Stereoisomerism | Phylogeny |
| Metabolism | 12949186 | Iron deficiency leads to inhibition of oxygen transfer and enhanced formation of virulence factors in cultures of Pseudomonas aeruginosa PAO1. | Kim EJ, Sabra W, Zeng AP | Microbiology (Reading) | 10.1099/mic.0.26276-0 | 2003 | Iron/*metabolism, Lipopolysaccharides/*biosynthesis, Oxygen/*metabolism, Pseudomonas aeruginosa/*pathogenicity/physiology, *Virulence | |
| Biotechnology | 14503713 | Antimicrobial performance of alkaline ionic fluid (GC-100X) and its ability to remove Escherichia coli O157:H7 from the surface of tomatoes. | Kwon NH, Kim SH, Kim JY, Lim JY, Kim JM, Jung WK, Park KT, Bae WK, Noh KM, Choi JW, Hur J, Park YH | J Food Prot | 10.4315/0362-028x-66.9.1604 | 2003 | Chlorine/pharmacology, Colony Count, Microbial, Disinfectants/*pharmacology, Escherichia coli O157/*drug effects/growth & development, Food Microbiology, Hydrogen-Ion Concentration, Lycopersicon esculentum/*microbiology, Temperature, Time Factors, Treatment Outcome, Xylitol/pharmacology | Pathogenicity |
| Metabolism | 16078193 | A low-temperature heteronuclear NMR study of two exchanging conformations of metal-bound pyoverdin PaA from Pseudomonas aeruginosa. | Tzou DL, Wasielewski E, Abdallah MA, Kieffer B, Atkinson RA | Biopolymers | 10.1002/bip.20343 | 2005 | Carbon Isotopes, *Cold Temperature, Culture Media/chemistry, Gallium/chemistry, Hydrogen-Ion Concentration, Iron/*metabolism, Iron Deficiencies, Kinetics, Molecular Conformation, Nitrogen Isotopes, *Nuclear Magnetic Resonance, Biomolecular, Oligopeptides/*analysis/chemistry/metabolism, Protons, Pseudomonas aeruginosa/*chemistry/genetics/growth & development, Siderophores/analysis/chemistry | Enzymology |
| Metabolism | 16245923 | The structure-activity relationship of ferric pyoverdine bound to its outer membrane transporter: implications for the mechanism of iron uptake. | Schons V, Atkinson RA, Dugave C, Graff R, Mislin GL, Rochet L, Hennard C, Kieffer B, Abdallah MA, Schalk IJ | Biochemistry | 10.1021/bi051155s | 2005 | Bacterial Outer Membrane Proteins/chemistry/*metabolism, Binding Sites, Cell Membrane/metabolism, Hydrogen-Ion Concentration, Iron/*metabolism, Iron Chelating Agents/chemistry/metabolism, Kinetics, Molecular Structure, Oligopeptides/chemistry/*metabolism, Pseudomonas aeruginosa/*metabolism, Siderophores/chemistry/*metabolism, Structure-Activity Relationship | Enzymology |
| Metabolism | 18298082 | Multiple conformations of the metal-bound pyoverdine PvdI, a siderophore of Pseudomonas aeruginosa: a nuclear magnetic resonance study. | Wasielewski E, Tzou DL, Dillmann B, Czaplicki J, Abdallah MA, Atkinson RA, Kieffer B | Biochemistry | 10.1021/bi702214s | 2008 | Bacterial Proteins/*chemistry/metabolism, Gallium/*metabolism, Kinetics, Magnetic Resonance Spectroscopy, Oligopeptides/*chemistry/metabolism, Periplasm/chemistry/metabolism, Protein Conformation, Protein Transport, Siderophores/*chemistry/metabolism | Enzymology |
| Metabolism | 19504741 | FpvA bound to non-cognate pyoverdines: molecular basis of siderophore recognition by an iron transporter. | Greenwald J, Nader M, Celia H, Gruffaz C, Geoffroy V, Meyer JM, Schalk IJ, Pattus F | Mol Microbiol | 10.1111/j.1365-2958.2009.06721.x | 2009 | Bacterial Outer Membrane Proteins/*metabolism, Circular Dichroism, Gene Expression Regulation, Bacterial, Iron/metabolism, Ligands, Oligopeptides/*metabolism, Protein Binding, Protein Structure, Tertiary, Pseudomonas aeruginosa/*metabolism, Siderophores/*metabolism, Substrate Specificity | |
| 20732171 | Inhibition of iron toxicity in rat hepatocyte cultures by pyoverdin Pa A, the peptidic fluorescent siderophore of Pseudomonas aeruginosa. | Jego P, Hubert N, Moirand R, Morel I, Pasdeloup N, Ocaktan A, Abdallah M, Brissot P, Lescoat G | Toxicol In Vitro | 10.1016/0887-2333(93)90112-i | 1993 | |||
| Pathogenicity | 22247408 | An in vitro comparison of two silver-containing antimicrobial wound dressings . | Hooper SJ, Williams DW, Thomas DW, Hill KE, Percival SL | Ostomy Wound Manage | 2012 | Anti-Infective Agents/pharmacology/*therapeutic use, *Bandages, Humans, In Vitro Techniques, Microscopy, Confocal, Silver/pharmacology/*therapeutic use, Wound Healing/*drug effects | ||
| Enzymology | 23203413 | In vitro and in vivo antibacterial activities of cyanidinum chloride-loaded liposomes against a resistant strain of Pseudomonas aeruginosa. | Gharib A, Faezizadeh Z, Mesbah-Namin SA | Planta Med | 10.1055/s-0032-1327952 | 2012 | Animals, Anthocyanins/*administration & dosage/isolation & purification, Anti-Bacterial Agents/*administration & dosage, Drug Resistance, Bacterial/drug effects, Fruit/*chemistry, Liposomes/administration & dosage, Male, Mice, Mice, Inbred BALB C, Microbial Sensitivity Tests, Plant Extracts/isolation & purification/*pharmacology, Pseudomonas aeruginosa/*drug effects, Wound Infection/*drug therapy | Phylogeny |
| Metabolism | 23997333 | Biodegradation of Low Density Polythene (LDPE) by Pseudomonas Species. | Kyaw BM, Champakalakshmi R, Sakharkar MK, Lim CS, Sakharkar KR | Indian J Microbiol | 10.1007/s12088-012-0250-6 | 2012 | ||
| Metabolism | 24012541 | Exploration and prediction of interactions between methanotrophs and heterotrophs. | Stock M, Hoefman S, Kerckhof FM, Boon N, De Vos P, De Baets B, Heylen K, Waegeman W | Res Microbiol | 10.1016/j.resmic.2013.08.006 | 2013 | Bacteria/*growth & development/*metabolism, Carbon/metabolism, Energy Metabolism, *Heterotrophic Processes, Methane/*metabolism, *Microbial Interactions, Nitrogen/metabolism | |
| Pathogenicity | 26125555 | Distribution and Inhibition of Liposomes on Staphylococcus aureus and Pseudomonas aeruginosa Biofilm. | Dong D, Thomas N, Thierry B, Vreugde S, Prestidge CA, Wormald PJ | PLoS One | 10.1371/journal.pone.0131806 | 2015 | Anti-Bacterial Agents/*pharmacology, Biofilms/drug effects/*growth & development, Humans, Liposomes/*pharmacology, Microscopy, Confocal, Phospholipids/pharmacology, Pseudomonas Infections/drug therapy, Pseudomonas aeruginosa/drug effects/*growth & development, Staphylococcal Infections/drug therapy, Staphylococcus aureus/drug effects/*growth & development | |
| Metabolism | 29990889 | Stressed degradation studies of domiphen bromide by LC-ESI-MS/MS identify a novel promising antimicrobial agent. | Fumagalli L, Regazzoni LG, Straniero V, Valoti E, Aldini G, Vistoli G, Carini M, Picozzi C | J Pharm Biomed Anal | 10.1016/j.jpba.2018.06.055 | 2018 | Anti-Infective Agents/*analysis/*metabolism/pharmacology, Bacillus cereus/drug effects/metabolism, Chromatography, High Pressure Liquid/methods, Chromatography, Liquid/methods, Escherichia coli/drug effects/metabolism, Quaternary Ammonium Compounds/*analysis/*metabolism/pharmacology, Spectrometry, Mass, Electrospray Ionization/methods, Staphylococcus aureus/drug effects/metabolism, Tandem Mass Spectrometry/*methods | Pathogenicity |
| Pathogenicity | 30970403 | [A novel nanoparticle in treatment of staphylococcus aureus and pseudomonas aeruginosa biofilms]. | Huang SM, Zhao YL, Dong D, Zhang YQ, Geng J | Lin Chung Er Bi Yan Hou Tou Jing Wai Ke Za Zhi | 10.13201/j.issn.1001-1781.2019.04.010 | 2019 | *Biofilms, Humans, *Nanoparticles, *Pseudomonas Infections/prevention & control, Pseudomonas aeruginosa, *Staphylococcal Infections/prevention & control, Staphylococcus aureus | |
| Phylogeny | 33162956 | Antimicrobial Potential of Streptomyces ansochromogenes (PB3) Isolated From a Plant Native to the Amazon Against Pseudomonas aeruginosa. | Amorim EADF, Castro EJM, da Souza SV, Alves MS, Dias LRL, Melo MHF, da Silva IMA, Villis PCM, Bonfim MRQ, Falcai A, Silva MRC, Monteiro-Neto V, Alianca A, da Silva LCN, de Miranda RCM | Front Microbiol | 10.3389/fmicb.2020.574693 | 2020 | ||
| Pathogenicity | 33741516 | Morpholinium-based ionic liquids show antimicrobial activity against clinical isolates of Pseudomonas aeruginosa. | Clapa T, Michalski J, Syguda A, Narozna D, van Oostrum P, Reimhult E | Res Microbiol | 10.1016/j.resmic.2021.103817 | 2021 | Anti-Bacterial Agents/*pharmacology, Biofilms/growth & development, Drug Resistance, Multiple, Bacterial, Humans, Ionic Liquids/*chemistry/classification/*pharmacology, Microbial Sensitivity Tests, Morpholines/chemistry/*pharmacology, Pseudomonas Infections/*microbiology, Pseudomonas aeruginosa/*drug effects/growth & development/pathogenicity, Virulence Factors/antagonists & inhibitors | Phylogeny |
| 34954434 | Immobilized arginine/tryptophan-rich cyclic dodecapeptide on reduced graphene oxide anchored with manganese dioxide for microbial biofilm eradication. | Samak NA, Selim MS, Hao Z, Xing J | J Hazard Mater | 10.1016/j.jhazmat.2021.128035 | 2021 | Anti-Bacterial Agents/pharmacology, Antimicrobial Peptides, Arginine, Biofilms, Graphite, *Manganese Compounds, Microbial Sensitivity Tests, *Oxides, Pseudomonas aeruginosa, Tryptophan | ||
| 35434009 | The effects of LL-37 on virulence factors related to the quorum sensing system of Pseudomonas aeruginosa. | Xiao Q, Luo Y, Shi W, Lu Y, Xiong R, Wu X, Huang H, Zhao C, Zeng J, Chen C | Ann Transl Med | 10.21037/atm-22-617 | 2022 | |||
| Phylogeny | 36457342 | Isolation, Characterization, and Effect on Biofilm Formation of Bacteriocin Produced by Lactococcus lactis F01 Isolated from Cyprinus carpio and Application for Biopreservation of Fish Sausage. | Fotso Techeu UD, Kaktcham PM, Momo HK, Foko Kouam EM, Tchamani Piame L, Ngouenam RJ, Zambou Ngoufack F | Biomed Res Int | 10.1155/2022/8437926 | 2022 | Animals, Anti-Bacterial Agents/pharmacology, *Bacteriocins/pharmacology, Biofilms, *Carps/microbiology, Escherichia coli, *Lactococcus lactis, RNA, Ribosomal, 16S/genetics, *Meat Products/microbiology, *Food Preservation |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 16444 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22644) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22644 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 41240 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15989 | ||||
| 60988 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 56489) | https://www.ccug.se/strain?id=56489 | |||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 68369 | Automatically annotated from API 20NE | |||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
| 82011 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID13749.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
| 116091 | Curators of the CIP | Collection of Institut Pasteur (CIP 104116) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104116 |