Strain identifier

BacDive ID: 12756

Type strain: Yes

Species: Azotobacter salinestris

Strain Designation: 184

Strain history: IAM 15020 <-- ATCC 49674 <-- W. J. Page and S. Shivprasad 184.

NCBI tax ID(s): 69964 (species)

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General

@ref: 4415

BacDive-ID: 12756

DSM-Number: 11553

keywords: 16S sequence, Bacteria

description: Azotobacter salinestris 184 is a bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 69964
  • Matching level: species

strain history

@refhistory
4415<- ATCC <- W. J. Page, 184 <- F. D. Cook
67770IAM 15020 <-- ATCC 49674 <-- W. J. Page and S. Shivprasad 184.

doi: 10.13145/bacdive12756.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Azotobacter
  • species: Azotobacter salinestris
  • full scientific name: Azotobacter salinestris Page and Shivprasad 1991

@ref: 4415

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Azotobacter

species: Azotobacter salinestris

full scientific name: Azotobacter salinestris Page and Shivprasad 1991

strain designation: 184

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 4415
  • name: DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/441
  • composition: Name: DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441) Composition: Agar 14.881 g/l DL-Malate 1.98413 g/l D-Glucose 1.98413 g/l D-Mannitol 1.98413 g/l Na-pyruvate 0.992063 g/l Disodium succinate 0.992063 g/l K2HPO4 0.892857 g/l KH2PO4 0.0992065 g/l NaCl 0.0992065 g/l CaCl2 x 2 H2O 0.0992065 g/l MgSO4 x 7 H2O 0.0992065 g/l Yeast extract 0.0496032 g/l FeSO4 x 7 H2O 0.00992065 g/l MnSO4 x H2O 0.00496032 g/l NaVO3 x H2O 0.00496032 g/l Nicotinic acid 0.00248016 g/l Pyridoxine hydrochloride 0.00248016 g/l Calcium pantothenate 0.00248016 g/l Thiamine-HCl x 2 H2O 0.00248016 g/l H3BO3 0.000892857 g/l CoCl2 x 6 H2O 0.000595238 g/l Riboflavin 0.000496032 g/l ZnSO4 x 7 H2O 0.000297619 g/l MnCl2 x 4 H2O 8.92857e-05 g/l Na2MoO4 x 2 H2O 8.92857e-05 g/l NiCl2 x 6 H2O 5.95238e-05 g/l Vitamin B12 4.96032e-05 g/l CuCl2 x 2 H2O 2.97619e-05 g/l Folic acid 9.92063e-06 g/l Biotin 4.96032e-06 g/l Distilled water

culture temp

@refgrowthtypetemperature
4415positivegrowth30
67770positivegrowth26

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
4415soilAlbertaCanadaCANNorth America
67770Soil from AlbertaCanadaCANNorth America

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_21728.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_646;97_1313;98_8865;99_21728&stattab=map
  • Last taxonomy: Azotobacter salinestris
  • 16S sequence: AB681885
  • Sequence Identity:
  • Total samples: 701
  • soil counts: 204
  • aquatic counts: 172
  • animal counts: 290
  • plant counts: 35

Safety information

risk assessment

  • @ref: 4415
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Azotobacter salinestris small subunit ribosomal RNA gene, partial sequenceAF035213997nuccore69964
20218Azotobacter salinestris gene for 16S rRNA, partial sequenceAB1756561477nuccore69964
20218Azotobacter salinestris strain ATCC 49674 16S ribosomal RNA gene, partial sequenceJX680337859nuccore69964
20218Azotobacter salinestris gene for 16S rRNA, partial sequence, strain: NBRC 102611AB6818851461nuccore69964

External links

@ref: 4415

culture collection no.: DSM 11553, ATCC 49674, JCM 21483, CECT 9206, IAM 15020, NBRC 102611, TBRC 7240

straininfo link

  • @ref: 81965
  • straininfo: 42613

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny28984556Pseudomonas tarimensis sp. nov., an endophytic bacteria isolated from Populus euphratica.Anwar N, Rozahon M, Zayadan B, Mamtimin H, Abdurahman M, Kurban M, Abdurusul M, Mamtimin T, Abdukerim M, Rahman EInt J Syst Evol Microbiol10.1099/ijsem.0.0022952017Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Plant Stems/*microbiology, Populus/*microbiology, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Ubiquinone/chemistryTranscriptome
34771358Biosynthesis of Poly-ss-Hydroxybutyrate (PHB) from Different Bacterial Strains Grown on Alternative Cheap Carbon Sources.El-Kadi SM, Elbagory M, El-Zawawy HAH, El-Shaer HFA, Shoukry AA, El-Nahrawy S, Omara AE, Ali DFIPolymers (Basel)10.3390/polym132138012021

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
4415Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11553)https://www.dsmz.de/collection/catalogue/details/culture/DSM-11553
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
81965Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID42613.1StrainInfo: A central database for resolving microbial strain identifiers