Strain identifier

BacDive ID: 12747

Type strain: No

Species: Azotobacter vinelandii

Strain history: <- I. Couperwhite <- J.R. Norris <- H.L. Jensen

NCBI tax ID(s): 354 (species)

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General

@ref: 295

BacDive-ID: 12747

DSM-Number: 576

keywords: 16S sequence, Bacteria, mesophilic

description: Azotobacter vinelandii DSM 576 is a mesophilic bacterium of the family Pseudomonadaceae.

NCBI tax id

  • NCBI tax id: 354
  • Matching level: species

strain history

  • @ref: 295
  • history: <- I. Couperwhite <- J.R. Norris <- H.L. Jensen

doi: 10.13145/bacdive12747.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Azotobacter
  • species: Azotobacter vinelandii
  • full scientific name: Azotobacter vinelandii Lipman 1903 (Approved Lists 1980)

@ref: 295

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Azotobacter

species: Azotobacter vinelandii

full scientific name: Azotobacter vinelandii Lipman 1903

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
295DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441)yeshttps://mediadive.dsmz.de/medium/441Name: DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441) Composition: Agar 14.881 g/l DL-Malate 1.98413 g/l D-Glucose 1.98413 g/l D-Mannitol 1.98413 g/l Na-pyruvate 0.992063 g/l Disodium succinate 0.992063 g/l K2HPO4 0.892857 g/l KH2PO4 0.0992065 g/l NaCl 0.0992065 g/l CaCl2 x 2 H2O 0.0992065 g/l MgSO4 x 7 H2O 0.0992065 g/l Yeast extract 0.0496032 g/l FeSO4 x 7 H2O 0.00992065 g/l MnSO4 x H2O 0.00496032 g/l NaVO3 x H2O 0.00496032 g/l Nicotinic acid 0.00248016 g/l Pyridoxine hydrochloride 0.00248016 g/l Calcium pantothenate 0.00248016 g/l Thiamine-HCl x 2 H2O 0.00248016 g/l H3BO3 0.000892857 g/l CoCl2 x 6 H2O 0.000595238 g/l Riboflavin 0.000496032 g/l ZnSO4 x 7 H2O 0.000297619 g/l MnCl2 x 4 H2O 8.92857e-05 g/l Na2MoO4 x 2 H2O 8.92857e-05 g/l NiCl2 x 6 H2O 5.95238e-05 g/l Vitamin B12 4.96032e-05 g/l CuCl2 x 2 H2O 2.97619e-05 g/l Folic acid 9.92063e-06 g/l Biotin 4.96032e-06 g/l Distilled water
295AZOTOBACTER MEDIUM (DSMZ Medium 3)yeshttps://mediadive.dsmz.de/medium/3Name: AZOTOBACTER MEDIUM (DSMZ Medium 3) Composition: Agar 15.0 g/l CaCO3 5.0 g/l Glucose 5.0 g/l Mannitol 5.0 g/l K2HPO4 0.9 g/l KH2PO4 0.1 g/l MgSO4 x 7 H2O 0.1 g/l CaCl2 x 2 H2O 0.1 g/l FeSO4 x 7 H2O 0.01 g/l Na2MoO4 x 2 H2O 0.005 g/l Distilled water

culture temp

  • @ref: 295
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

compound production

@refcompound
295alginate
295capsule depolymerase
295pigment yellow-green, water-soluble

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_2019.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_646;97_1313;98_1582;99_2019&stattab=map
  • Last taxonomy: Azotobacter vinelandii
  • 16S sequence: AY336565
  • Sequence Identity:
  • Total samples: 4061
  • soil counts: 688
  • aquatic counts: 1559
  • animal counts: 1425
  • plant counts: 389

Safety information

risk assessment

  • @ref: 295
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Azotobacter vinelandii DSM576 16S ribosomal RNA gene, partial sequence
  • accession: AY336565
  • length: 1398
  • database: ena
  • NCBI tax ID: 354

External links

@ref: 295

culture collection no.: DSM 576, NCIB 9068

straininfo link

  • @ref: 81956
  • straininfo: 47225

literature

  • Pubmed-ID: 16346747
  • title: Bacterial Alginate Produced by a Mutant of Azotobacter vinelandii.
  • authors: Chen WP, Chen JY, Chang SC, Su CL
  • journal: Appl Environ Microbiol
  • DOI: 10.1128/aem.49.3.543-546.1985
  • year: 1985

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
295Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 576)https://www.dsmz.de/collection/catalogue/details/culture/DSM-576
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
81956Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47225.1StrainInfo: A central database for resolving microbial strain identifiers