Strain identifier

BacDive ID: 12724

Type strain: No

Species: Azotobacter beijerinckii

Strain Designation: 56

Strain history: <- D. Claus, 56

NCBI tax ID(s): 170623 (species)

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General

@ref: 161

BacDive-ID: 12724

DSM-Number: 373

keywords: genome sequence, Bacteria, mesophilic

description: Azotobacter beijerinckii 56 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 170623
  • Matching level: species

strain history: <- D. Claus, 56

doi: 10.13145/bacdive12724.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Pseudomonadaceae
  • genus: Azotobacter
  • species: Azotobacter beijerinckii
  • full scientific name: Azotobacter beijerinckii Lipman 1904 (Approved Lists 1980)

@ref: 161

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Azotobacter

species: Azotobacter beijerinckii

full scientific name: Azotobacter beijerinckii Lipman 1904

strain designation: 56

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
161DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441)yeshttps://bacmedia.dsmz.de/medium/441Name: DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441) Composition: Agar 14.881 g/l DL-Malate 1.98413 g/l D-Glucose 1.98413 g/l D-Mannitol 1.98413 g/l Na-pyruvate 0.992063 g/l Disodium succinate 0.992063 g/l K2HPO4 0.892857 g/l KH2PO4 0.0992065 g/l NaCl 0.0992065 g/l CaCl2 x 2 H2O 0.0992065 g/l MgSO4 x 7 H2O 0.0992065 g/l Yeast extract 0.0496032 g/l FeSO4 x 7 H2O 0.00992065 g/l MnSO4 x H2O 0.00496032 g/l NaVO3 x H2O 0.00496032 g/l Nicotinic acid 0.00248016 g/l Thiamine-HCl x 2 H2O 0.00248016 g/l Calcium pantothenate 0.00248016 g/l Pyridoxine hydrochloride 0.00248016 g/l H3BO3 0.000892857 g/l CoCl2 x 6 H2O 0.000595238 g/l Riboflavin 0.000496032 g/l ZnSO4 x 7 H2O 0.000297619 g/l MnCl2 x 4 H2O 8.92857e-05 g/l Na2MoO4 x 2 H2O 8.92857e-05 g/l NiCl2 x 6 H2O 5.95238e-05 g/l Vitamin B12 4.96032e-05 g/l CuCl2 x 2 H2O 2.97619e-05 g/l Folic acid 9.92063e-06 g/l Biotin 4.96032e-06 g/l Distilled water
161AZOTOBACTER MEDIUM (DSMZ Medium 3)yeshttps://bacmedia.dsmz.de/medium/3Name: AZOTOBACTER MEDIUM (DSMZ Medium 3) Composition: Agar 15.0 g/l CaCO3 5.0 g/l Glucose 5.0 g/l Mannitol 5.0 g/l K2HPO4 0.9 g/l KH2PO4 0.1 g/l MgSO4 x 7 H2O 0.1 g/l CaCl2 x 2 H2O 0.1 g/l FeSO4 x 7 H2O 0.01 g/l Na2MoO4 x 2 H2O 0.005 g/l Distilled water

culture temp

  • @ref: 161
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 161
  • sample type: soil
  • geographic location: Göttingen
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 161
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Azotobacter beijerinckii DSM 373GCA_900108885contigncbi170623
66792Azotobacter beijerinckii strain DSM 373170623.8wgspatric170623
66792Azotobacter beijerinckii DSM 3732597490354draftimg170623

GC content

  • @ref: 161
  • GC-content: 65.5

External links

@ref: 161

culture collection no.: DSM 373

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/4324

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
161Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 373)https://www.dsmz.de/collection/catalogue/details/culture/DSM-373
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)