Strain identifier

BacDive ID: 12494

Type strain: Yes

Species: Jahnella thaxteri

Strain Designation: Pl t4

Strain history: DSM 14626 <-- H. Reichenbach Pl t4.

NCBI tax ID(s): 889265 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 5419

BacDive-ID: 12494

DSM-Number: 14626

keywords: 16S sequence, Bacteria, mesophilic

description: Jahnella thaxteri Pl t4 is a mesophilic bacterium that builds a fruiting body and was isolated from soil.

NCBI tax id

  • NCBI tax id: 889265
  • Matching level: species

strain history

@refhistory
5419<- H. Reichenbach; Pl t4
67770DSM 14626 <-- H. Reichenbach Pl t4.

doi: 10.13145/bacdive12494.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Myxococcales
  • family: Polyangiaceae
  • genus: Jahnella
  • species: Jahnella thaxteri
  • full scientific name: Jahnella thaxteri corrig. (ex Jahn 1924) Reichenbach 2007
  • synonyms

    • @ref: 20215
    • synonym: Jahnia thaxteri

@ref: 5419

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Myxococcales

family: Polyangiaceae

genus: Jahnella

species: Jahnella thaxteri

full scientific name: Jahnella thaxteri (ex Jahn 1924) Reichenbach 2007

strain designation: Pl t4

type strain: yes

Morphology

multicellular morphology

  • @ref: 18281
  • forms multicellular complex: yes
  • complex name: fruiting body

Culture and growth conditions

culture medium

  • @ref: 5419
  • name: VY/2 AGAR (DSMZ Medium 9)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/9
  • composition: Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
5419positivegrowth37mesophilic
67770positivegrowth30mesophilic

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
5419soilSouth AfricaZAFAfrica
67770Sandy soilSouth AfricaZAFAfrica

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 5419
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 5419
  • description: Jahnella thaxteri strain Pl t4 16S ribosomal RNA gene, complete sequence
  • accession: GU207876
  • length: 1550
  • database: ena
  • NCBI tax ID: 889265

External links

@ref: 5419

culture collection no.: DSM 14626, CIP 109123, JCM 12631

straininfo link

  • @ref: 81713
  • straininfo: 297603

literature

  • topic: Phylogeny
  • Pubmed-ID: 27046779
  • title: Racemicystis crocea gen. nov., sp. nov., a soil myxobacterium in the family Polyangiaceae.
  • authors: Awal RP, Garcia R, Muller R
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.001045
  • year: 2016
  • mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Myxococcales/*classification/genetics/isolation & purification, Philippines, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology
  • topic2: Transcriptome

Reference

@idauthorscataloguedoi/urltitle
5419Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14626)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14626
18281Reichenbach, H.Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
81713Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID297603.1StrainInfo: A central database for resolving microbial strain identifiers