Strain identifier
BacDive ID: 1192
Type strain: 
Species: Bacillus spizizenii
Strain Designation: W23 SR
Strain history: <- BGSC (Bacillus subtilis) <- C. B. Thorne
NCBI tax ID(s): 96241 (species)
version 8.1 (current version)
General
@ref: 2629
BacDive-ID: 1192
DSM-Number: 6405
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Bacillus spizizenii W23 SR is a mesophilic human pathogen of the family Bacillaceae.
NCBI tax id
- NCBI tax id: 96241
- Matching level: species
strain history
- @ref: 2629
- history: <- BGSC (Bacillus subtilis) <- C. B. Thorne
doi: 10.13145/bacdive1192.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus spizizenii
- full scientific name: Bacillus spizizenii (Nakamura et al. 1999) Dunlap et al. 2020
synonyms
- @ref: 20215
- synonym: Bacillus subtilis subsp. spizizenii
@ref: 2629
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus spizizenii
full scientific name: Bacillus spizizenii (Nakamura et al. 1999) Dunlap et al. 2020
strain designation: W23 SR
type strain: no
Culture and growth conditions
culture medium
- @ref: 2629
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 2629
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_21.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_17;97_17;98_20;99_21&stattab=map
- Last taxonomy: Bacillus
- 16S sequence: DQ195067
- Sequence Identity:
- Total samples: 18201
- soil counts: 3768
- aquatic counts: 2854
- animal counts: 9674
- plant counts: 1905
Safety information
risk assessment
- @ref: 2629
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Bacillus subtilis subsp. spizizenii isolate DSM 6405 16S ribosomal RNA gene, partial sequence | DQ195067 | 1494 | ena | 96241 |
| 20218 | Bacillus subtilis strain DSM 6405 16S ribosomal RNA gene, partial sequence | DQ452508 | 1379 | ena | 1423 |
External links
@ref: 2629
culture collection no.: DSM 6405, BGSC 2A3
straininfo link
- @ref: 70849
- straininfo: 48184
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 2629 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6405) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-6405 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 70849 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48184.1 | StrainInfo: A central database for resolving microbial strain identifiers |