Strain identifier

BacDive ID: 11811

Type strain: No

Species: Desulfotomaculum sp.

Strain Designation: MTS5

Strain history: <- Y. Tanimoto; MTS5 <- Y. Tanimoto and F. Bak {1992}

NCBI tax ID(s): 449309 (species)

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General

@ref: 3176

BacDive-ID: 11811

DSM-Number: 7474

keywords: 16S sequence, Bacteria, anaerobe

description: Desulfotomaculum sp. MTS5 is an anaerobe bacterium that was isolated from thermophilic fermenter sludge.

NCBI tax id

  • NCBI tax id: 449309
  • Matching level: species

strain history

  • @ref: 3176
  • history: <- Y. Tanimoto; MTS5 <- Y. Tanimoto and F. Bak {1992}

doi: 10.13145/bacdive11811.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Peptococcaceae
  • genus: Desulfotomaculum
  • species: Desulfotomaculum sp.
  • full scientific name: Desulfotomaculum Campbell and Postgate 1965 (Approved Lists 1980)

@ref: 3176

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Peptococcaceae

genus: Desulfotomaculum

species: Desulfotomaculum sp.

full scientific name: Desulfotomaculum sp.

strain designation: MTS5

type strain: no

Culture and growth conditions

culture medium

  • @ref: 3176
  • name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/194
  • composition: Name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194; with strain-specific modifications) Composition: Na2SO4 2.99103 g/l Na2CO3 1.49551 g/l NaCl 0.997009 g/l KCl 0.498504 g/l None 0.398804 g/l Na2S x 9 H2O 0.398804 g/l MgCl2 x 6 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

  • @ref: 3176
  • growth: positive
  • type: growth
  • temperature: 55

Physiology and metabolism

oxygen tolerance

  • @ref: 3176
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 3176
  • sample type: thermophilic fermenter sludge
  • geographic location: Tokyo
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Biodegradation
#Environmental#Terrestrial#Mud (Sludge)
#Condition#Thermophilic (>45°C)

taxonmaps

  • @ref: 69479
  • File name: preview.99_77377.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_403;96_32709;97_41424;98_54062;99_77377&stattab=map
  • Last taxonomy: Desulfofundulus
  • 16S sequence: Y11577
  • Sequence Identity:
  • Total samples: 120
  • soil counts: 16
  • aquatic counts: 38
  • animal counts: 65
  • plant counts: 1

Sequence information

16S sequences

  • @ref: 3176
  • description: Desulfotomaculum sp. 16S rRNA gene, DSM 7474
  • accession: Y11577
  • length: 1550
  • database: nuccore
  • NCBI tax ID: 41211

External links

@ref: 3176

culture collection no.: DSM 7474

straininfo link

  • @ref: 81029
  • straininfo: 48450

Reference

@idauthorscataloguedoi/urltitle
3176Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7474)https://www.dsmz.de/collection/catalogue/details/culture/DSM-7474
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
81029Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48450.1StrainInfo: A central database for resolving microbial strain identifiers