Strain identifier

BacDive ID: 11727

Type strain: Yes

Species: Mannheimia caviae

Strain Designation: T138021-75

Strain history: <- H. Christensen, Fac. Life Sci., Univ. Copenhagen, Frederiksberg, Denmark; T138021-75 <- M. Bisgaard <- W. Mannheim, Philipps-Univ. Marburg, Germany; HIM 1028-5

NCBI tax ID(s): 879276 (species)

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General

@ref: 16748

BacDive-ID: 11727

DSM-Number: 23207

keywords: 16S sequence, Bacteria, microaerophile, mesophilic, animal pathogen

description: Mannheimia caviae T138021-75 is a microaerophile, mesophilic animal pathogen that was isolated from guinea pig suffering from purulent conjunctivitis.

NCBI tax id

  • NCBI tax id: 879276
  • Matching level: species

strain history

  • @ref: 16748
  • history: <- H. Christensen, Fac. Life Sci., Univ. Copenhagen, Frederiksberg, Denmark; T138021-75 <- M. Bisgaard <- W. Mannheim, Philipps-Univ. Marburg, Germany; HIM 1028-5

doi: 10.13145/bacdive11727.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Mannheimia
  • species: Mannheimia caviae
  • full scientific name: Mannheimia caviae Christensen et al. 2011

@ref: 16748

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Mannheimia

species: Mannheimia caviae

full scientific name: Mannheimia caviae Christensen et al. 2011

strain designation: T138021-75

type strain: yes

Morphology

colony morphology

  • @ref: 16748
  • type of hemolysis: gamma
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

  • @ref: 16748
  • name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/693
  • composition: Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

@refgrowthtypetemperaturerange
16748positivegrowth37mesophilic
62179positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
16748microaerophile
62179microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837717992sucrose+builds acid from
6837716199urea-hydrolysis
6837727897tryptophan-energy source
6838129016arginine-hydrolysis
6838116988D-ribose-builds acid from
6838116899D-mannitol-builds acid from
6838130911sorbitol-builds acid from
6838117716lactose-builds acid from
6838127082trehalose-builds acid from
6838116634raffinose-builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate-hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan-builds acid from
6838117306maltose-builds acid from
6838128053melibiose-builds acid from
683816731melezitose-builds acid from
68381320055methyl beta-D-glucopyranoside-builds acid from
6838116443D-tagatose-builds acid from
6838116199urea-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6837735581indoleno
6838115688acetoinno

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6838115688acetoin-
6837735581indole-

enzymes

@refvalueactivityec
16748catalase+1.11.1.6
16748cytochrome-c oxidase+1.9.3.1
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase-
68381N-acetyl-beta-glucosaminidase-3.2.1.52
68381pyrrolidonyl arylamidase-3.4.19.3
68381beta-galactosidase+3.2.1.23
68381Alanyl-Phenylalanyl-Proline arylamidase-
68381alkaline phosphatase+3.1.3.1
68381alpha-galactosidase+3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase-3.2.1.21
68381arginine dihydrolase-3.5.3.6
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377alkaline phosphatase+3.1.3.1
68377urease-3.5.1.5

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
16748++-++--++----
16748-++-++--++---

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
16748--+-++------+/------+-------------

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentsampling date
16748guinea pig suffering from purulent conjunctivitisMarburgGermanyDEUEurope
62179Guinea pig,epidemic conjunctivitisMarburgGermanyDEUEurope1975

isolation source categories

Cat1Cat2Cat3
#Infection#Inflammation
#Host#Mammals#Rodentia (Other)

Safety information

risk assessment

  • @ref: 16748
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 16748
  • description: Mannheimia caviae strain T138021-75 16S ribosomal RNA gene, partial sequence
  • accession: HM439607
  • length: 1407
  • database: ena
  • NCBI tax ID: 879276

GC content

  • @ref: 16748
  • GC-content: 41.4
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 16748

culture collection no.: DSM 23207, CCUG 59995, HIM 1028-5

straininfo link

  • @ref: 80946
  • straininfo: 397649

literature

  • topic: Phylogeny
  • Pubmed-ID: 20729306
  • title: Mannheimia caviae sp. nov., isolated from epidemic conjunctivitis and otitis media in guinea pigs.
  • authors: Christensen H, Bojesen AM, Bisgaard M
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.026518-0
  • year: 2010
  • mesh: Animals, Bacterial Typing Techniques, Base Composition, Conjunctivitis/*microbiology, DNA, Bacterial/genetics, Genes, Bacterial, Guinea Pigs/microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Otitis Media/*microbiology, Pasteurellaceae/*classification/genetics/isolation & purification, Pasteurellaceae Infections/*microbiology/veterinary, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitle
16748Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23207)https://www.dsmz.de/collection/catalogue/details/culture/DSM-23207
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
62179Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 59995)https://www.ccug.se/strain?id=59995
68377Automatically annotated from API NH
68381Automatically annotated from API rID32STR
80946Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID397649.1StrainInfo: A central database for resolving microbial strain identifiers