Strain identifier
BacDive ID: 11605
Type strain: 
Species: Paenibacillus campinasensis
Strain Designation: 324
Strain history: Y.-H. Park 324.
NCBI tax ID(s): 66347 (species)
version 8.1 (current version)
General
@ref: 16082
BacDive-ID: 11605
DSM-Number: 21989
keywords: 16S sequence, Bacteria, mesophilic
description: Paenibacillus campinasensis 324 is a mesophilic bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 66347
- Matching level: species
strain history
| @ref | history |
|---|---|
| 16082 | <- JCM/RIKEN <- Y.-H. Park, Korea Res. Inst. Biosci. & Biotechnol. (KRIBB), Taejon, South Korea; 324 |
| 67770 | Y.-H. Park 324. |
doi: 10.13145/bacdive11605.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus campinasensis
- full scientific name: Paenibacillus campinasensis Yoon et al. 1998
@ref: 16082
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus campinasensis
full scientific name: Paenibacillus campinasensis Yoon et al. 1998
strain designation: 324
type strain: yes
Culture and growth conditions
culture medium
- @ref: 16082
- name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
- growth: yes
- link: https://mediadive.dsmz.de/medium/220
- composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 16082 | positive | growth | 30 | mesophilic |
| 67770 | positive | growth | 37 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-7
enzymes
- @ref: 67770
- value: cyclomaltodextrin glucanotransferase
- ec: 2.4.1.19
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 16082 | Soil | Brazil | BRA | Middle and South America |
| 67770 | Soil | Brazil | BRA | Middle and South America |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_14144.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_295;97_8754;98_10730;99_14144&stattab=map
- Last taxonomy: Paenibacillus campinasensis subclade
- 16S sequence: AB073187
- Sequence Identity:
- Total samples: 597
- soil counts: 202
- aquatic counts: 56
- animal counts: 268
- plant counts: 71
Safety information
risk assessment
- @ref: 16082
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Paenibacillus campinasensis gene for 16S rRNA, partial sequence | AB073187 | 1503 | ena | 66347 |
| 16082 | Paenibacillus sp. strain 324 16S ribosomal RNA gene, complete sequence | AF021924 | 1508 | ena | 66347 |
GC content
- @ref: 16082
- GC-content: 50.9
- method: high performance liquid chromatography (HPLC)
External links
@ref: 16082
culture collection no.: DSM 21989, BCRC 17341, JCM 11200, KCTC 0364BP
straininfo link
- @ref: 80831
- straininfo: 97889
literature
- topic: Phylogeny
- Pubmed-ID: 9734037
- title: Paenibacillus campinasensis sp. nov., a cyclodextrin-producing bacterium isolated in Brazil.
- authors: Yoon JH, Yim DK, Lee JS, Shin KS, Sato HH, Lee ST, Park YK, Park YH
- journal: Int J Syst Bacteriol
- DOI: 10.1099/00207713-48-3-833
- year: 1998
- mesh: Bacillus/*classification/genetics/physiology, Base Composition, Base Sequence, Brazil, Cyclodextrins/*biosynthesis, Molecular Sequence Data, Phylogeny
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 16082 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21989) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21989 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 80831 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID97889.1 | StrainInfo: A central database for resolving microbial strain identifiers |