Strain identifier

BacDive ID: 11410

Type strain: No

Species: Brevibacillus parabrevis

Strain Designation: BG

Strain history: IAM 1031 <-- IFO 3331 <-- ATCC 8185 <-- N. R. Smith NRS 751 <-- R. J. Dubos strain BG.

NCBI tax ID(s): 54914 (species)

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General

@ref: 152

BacDive-ID: 11410

DSM-Number: 362

keywords: genome sequence, 16S sequence, Bacteria, mesophilic, antibiotic compound production, human pathogen

description: Brevibacillus parabrevis BG is a mesophilic human pathogen that produces antibiotic compounds and was isolated from Soil.

NCBI tax id

  • NCBI tax id: 54914
  • Matching level: species

strain history

@refhistory
152<- CCM <- BU CSAV <- NCIB <- CDA <- R.J. Dubos (Bacillus brevis), strain BG
67770IAM 1031 <-- IFO 3331 <-- ATCC 8185 <-- N. R. Smith NRS 751 <-- R. J. Dubos strain BG.

doi: 10.13145/bacdive11410.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Brevibacillus
  • species: Brevibacillus parabrevis
  • full scientific name: Brevibacillus parabrevis (Takagi et al. 1993) Shida et al. 1996

  • synonyms

    • @ref: 20215
    • synonym: Bacillus parabrevis

@ref: 152

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Brevibacillus

species: Brevibacillus parabrevis

full scientific name: Brevibacillus parabrevis (Takagi et al. 1993) Shida et al. 1996

strain designation: BG

type strain: no

Culture and growth conditions

culture medium

  • @ref: 152
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
152positivegrowth30mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

compound production

@refcompound
152gramicidin
152tyrocidin

metabolite production

  • @ref: 67770
  • metabolite: gramicidin
  • production: yes

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_7560.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_95;96_241;97_263;98_292;99_7560&stattab=map
  • Last taxonomy: Brevibacillus
  • 16S sequence: AB680065
  • Sequence Identity:
  • Total samples: 653
  • soil counts: 119
  • aquatic counts: 479
  • animal counts: 42
  • plant counts: 13

Safety information

risk assessment

  • @ref: 152
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Brevibacillus parabrevis gene for 16S rRNA, partial sequence, strain: NBRC 3331
  • accession: AB680065
  • length: 1461
  • database: ena
  • NCBI tax ID: 54914

Genome sequences

  • @ref: 66792
  • description: Brevibacillus brevis ATCC 8185
  • accession: 2563366634
  • assembly level: draft
  • database: img
  • NCBI tax ID: 1393

GC content

  • @ref: 152
  • GC-content: 42.2

External links

@ref: 152

culture collection no.: DSM 362, ATCC 8185, CCM 1089, IAM 1031, IFO 3331, NBRC 3331, NCIB 8598, NRS 751, JCM 20017, BCRC 11047, BUCSAV 153, CDA 515, CN 2203, LMG 15973, NCFB 717, NCIMB 8598, RIMD 0205001

straininfo link

  • @ref: 80642
  • straininfo: 8372

literature

  • topic: Metabolism
  • Pubmed-ID: 15849407
  • title: Enhancement of linear gramicidin expression from Bacillus brevis ATCC 8185 by casein peptide.
  • authors: Nakai T, Yamauchi D, Kubota K
  • journal: Biosci Biotechnol Biochem
  • DOI: 10.1271/bbb.69.700
  • year: 2005
  • mesh: Animals, Bacillus/chemistry/*drug effects/*metabolism, Bacterial Proteins/metabolism, Caseins/*pharmacology, Cattle, Culture Media/pharmacology, Gene Expression Regulation, Bacterial/drug effects, Gramicidin/*biosynthesis/chemistry, Peptide Fragments/*pharmacology, Peptide Hydrolases/metabolism, Time Factors
  • topic2: Pathogenicity

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
152Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 362)https://www.dsmz.de/collection/catalogue/details/culture/DSM-362
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
80642Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID8372.1StrainInfo: A central database for resolving microbial strain identifiers