Strain identifier

BacDive ID: 11213

Type strain: Yes

Species: Nocardiopsis arabicus

Strain history: <- W.-J. Li, YIM

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General

@ref: 11931

BacDive-ID: 11213

DSM-Number: 44618

keywords: 16S sequence

description: Nocardiopsis arabicus DSM 44618 is an Actinobacterium that was isolated from soil in hypersaline habitat.

strain history

  • @ref: 11931
  • history: <- W.-J. Li, YIM

doi: 10.13145/bacdive11213.20240510.9

Name and taxonomic classification

@ref: 11931

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Nocardiopsaceae

genus: Nocardiopsis

species: Nocardiopsis arabicus

full scientific name: Nocardiopsis arabicus Li et al.

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11931MODIFIED CM+YE MEDIUM (B) (DSMZ Medium 910)yeshttps://mediadive.dsmz.de/medium/910Name: MODIFIED CM+YE MEDIUM (B) (DSMZ Medium 910) Composition: NaCl 100.0 g/l Agar 15.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Trisodium citrate x 2 H2O 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.0498 g/l Distilled water
11931GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)yeshttps://mediadive.dsmz.de/medium/1159Name: GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) Composition: NaCl 100.0 g/l Agar 15.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 11931
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 11931
  • sample type: soil in hypersaline habitat
  • geographic location: Xinjiang province
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Condition#Saline

taxonmaps

  • @ref: 69479
  • File name: preview.99_1740.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_152;96_659;97_1154;98_1377;99_1740&stattab=map
  • Last taxonomy: Nocardiopsis xinjiangensis
  • 16S sequence: AY082064
  • Sequence Identity:
  • Total samples: 125
  • soil counts: 20
  • aquatic counts: 2
  • animal counts: 100
  • plant counts: 3

Sequence information

16S sequences

  • @ref: 20218
  • description: Nocardiopsis sp. YIM90006 16S ribosomal RNA gene, partial sequence
  • accession: AY082064
  • length: 1496
  • database: nuccore
  • NCBI tax ID: 190198

External links

@ref: 11931

culture collection no.: DSM 44618, YIM 90006

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11931Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44618)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44618
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta