Strain identifier
BacDive ID: 11067
Type strain: 
Species: Kribbella yunnanensis
Strain history: DSM 15499 <-- W.-J. Li YIM 30006.
NCBI tax ID(s): 190194 (species)
version 8.1 (current version)
General
@ref: 5960
BacDive-ID: 11067
DSM-Number: 15499
keywords: 16S sequence, Bacteria, mesophilic
description: Kribbella yunnanensis DSM 15499 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 190194
- Matching level: species
strain history
| @ref | history |
|---|---|
| 5960 | <- W.-J. Li, YIM |
| 67770 | DSM 15499 <-- W.-J. Li YIM 30006. |
doi: 10.13145/bacdive11067.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Kribbellaceae
- genus: Kribbella
- species: Kribbella yunnanensis
- full scientific name: Kribbella yunnanensis Li et al. 2006
@ref: 5960
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Kribbellaceae
genus: Kribbella
species: Kribbella yunnanensis
full scientific name: Kribbella yunnanensis Li et al. 2006
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 5960 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
| 5960 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 67770 | positive | growth | 28 | mesophilic |
| 5960 | positive | growth | 28 | mesophilic |
Physiology and metabolism
murein
- @ref: 5960
- murein short key: A41.01
- type: A3gamma LL-Dpm-Gly
observation
- @ref: 67770
- observation: quinones: MK-9(H4)
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 5960 | soil | Yunnan Province | China | CHN | Asia |
| 67770 | Soil | Yunnan Province | China | CHN | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 5960
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 5960
- description: Nocardioides sp. YIM30006 16S ribosomal RNA gene, partial sequence
- accession: AY082061
- length: 1493
- database: ena
- NCBI tax ID: 190194
GC content
| @ref | GC-content | method |
|---|---|---|
| 5960 | 68.6 | |
| 67770 | 68.6 | thermal denaturation, midpoint method (Tm) |
External links
@ref: 5960
culture collection no.: DSM 15499, CCRC 16316, CCTCC AA 001019, YIM 30006, JCM 14307, BCRC 16316, KCTC 19024, NBRC 103562
straininfo link
- @ref: 80316
- straininfo: 134266
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 16423653 | Kribbella yunnanensis sp. nov., Kribbella alba sp. nov., two novel species of genus Kribbella isolated from soils in Yunnan, China. | Li WJ, Wang D, Zhang YQ, Xu LH, Jiang CL | Syst Appl Microbiol | 10.1016/j.syapm.2005.06.005 | 2005 | Actinobacteria/*classification/isolation & purification/physiology/ultrastructure, Base Composition, Base Sequence, China, DNA, Bacterial/chemistry/genetics, Microscopy, Electron, Scanning, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Polymerase Chain Reaction, RNA, Ribosomal, 16S/chemistry/genetics, Sequence Alignment, Soil Microbiology | Genetics |
| Phylogeny | 23584288 | Kribbella albertanoniae sp. nov., isolated from a Roman catacomb, and emended description of the genus Kribbella. | Everest GJ, Curtis SM, De Leo F, Urzi C, Meyers PR | Int J Syst Evol Microbiol | 10.1099/ijs.0.050237-0 | 2013 | Actinomycetales/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Biofilms, DNA, Bacterial/genetics, Genes, Bacterial, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rome, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/analysis | Genetics |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 5960 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15499) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-15499 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 80316 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID134266.1 | StrainInfo: A central database for resolving microbial strain identifiers |