Strain identifier
BacDive ID: 10997
Type strain: 
Species: Rhodococcus opacus
Strain Designation: C125
Strain history: <- F. Cottaar <- J. Sikkema (Corynebacterium sp. C125)
NCBI tax ID(s): 37919 (species)
version 8.1 (current version)
General
@ref: 3228
BacDive-ID: 10997
DSM-Number: 8531
keywords: mesophilic
description: Rhodococcus opacus C125 is a mesophilic prokaryote that was isolated from mixture of soil, sewage sludge and mud of river Rhine.
NCBI tax id
- NCBI tax id: 37919
- Matching level: species
strain history
- @ref: 3228
- history: <- F. Cottaar <- J. Sikkema (Corynebacterium sp. C125)
doi: 10.13145/bacdive10997.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- genus: Rhodococcus
- species: Rhodococcus opacus
- full scientific name: Rhodococcus opacus Klatte et al. 1995
synonyms
@ref synonym 20215 Rhodococcus imtechensis 20215 Rhodococcus percolatus
@ref: 3228
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Rhodococcus
species: Rhodococcus opacus
full scientific name: Rhodococcus opacus Klatte et al. 1995
strain designation: C125
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 3228 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
| 3228 | MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457) | yes | https://mediadive.dsmz.de/medium/457 | Name: MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457) Composition: Na2HPO4 2.44 g/l KH2PO4 1.52 g/l (NH4)2SO4 0.5 g/l MgSO4 x 7 H2O 0.2 g/l CaCl2 x 2 H2O 0.05 g/l EDTA 0.005 g/l FeSO4 x 7 H2O 0.002 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l MnCl2 x 4 H2O 3e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l NiCl2 x 6 H2O 2e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Distilled water |
culture temp
- @ref: 3228
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
murein
- @ref: 3228
- murein short key: A31
- type: A1gamma m-Dpm-direct
Isolation, sampling and environmental information
isolation
- @ref: 3228
- sample type: mixture of soil, sewage sludge and mud of river Rhine
- country: Netherlands
- origin.country: NLD
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Waste | #Sewage sludge |
| #Environmental | #Terrestrial | #Mud (Sludge) |
| #Environmental | #Aquatic | #River (Creek) |
| #Environmental | #Terrestrial | #Soil |
Safety information
risk assessment
- @ref: 3228
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 3228
culture collection no.: DSM 8531
straininfo link
- @ref: 80251
- straininfo: 48484
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 3228 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8531) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-8531 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 80251 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48484.1 | StrainInfo: A central database for resolving microbial strain identifiers |