Strain identifier
BacDive ID: 10851
Type strain: 
Species: Rhodococcus erythropolis
Strain Designation: huber, 2411
Strain history: <- ATCC (Arthrobacter paraffineus) <- Kyowa Ferm. Ind. Co., Ltd., 2411 <- K. Taraka and K. Kimura
NCBI tax ID(s): 1833 (species)
General
@ref: 101
BacDive-ID: 10851
DSM-Number: 312
keywords: 16S sequence, mesophilic, amino acid production, human pathogen
description: Rhodococcus erythropolis huber is a mesophilic human pathogen that produces amino acids and was isolated from soil.
NCBI tax id
- NCBI tax id: 1833
- Matching level: species
strain history
- @ref: 101
- history: <- ATCC (Arthrobacter paraffineus) <- Kyowa Ferm. Ind. Co., Ltd., 2411 <- K. Taraka and K. Kimura
doi: 10.13145/bacdive10851.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- genus: Rhodococcus
- species: Rhodococcus erythropolis
- full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)
synonyms
@ref synonym 20215 Mycobacterium erythropolis 20215 Rhodococcus qingshengii 20215 Rhodococcus baikonurensis 20215 Rhodococcus jialingiae 20215 Rhodococcus enclensis 20215 Rhodococcus degradans
@ref: 101
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Rhodococcus
species: Rhodococcus erythropolis
full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 emend. Nouioui et al. 2018
strain designation: huber, 2411
type strain: no
Morphology
multimedia
- @ref: 101
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_312.jpg
- caption: Medium 535 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 101
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 101 | positive | growth | 28 | mesophilic |
| 48681 | positive | growth | 30 | mesophilic |
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 101 | citric acid |
| 101 | L glutamic acid |
murein
- @ref: 101
- murein short key: A31
- type: A1gamma m-Dpm-direct
Isolation, sampling and environmental information
isolation
| @ref | sample type |
|---|---|
| 101 | soil |
| 48681 | Soil |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 101
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Rhodococcus erythropolis DSM 312 16S ribosomal RNA gene, partial sequence
- accession: AY017124
- length: 625
- database: ena
- NCBI tax ID: 1833
External links
@ref: 101
culture collection no.: DSM 312, ATCC 15591, CCUG 27198
straininfo link
- @ref: 80109
- straininfo: 46538
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 101 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 312) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-312 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 48681 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 27198) | https://www.ccug.se/strain?id=27198 | |||
| 80109 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID46538.1 | StrainInfo: A central database for resolving microbial strain identifiers |