Strain identifier
BacDive ID: 10656
Type strain: 
Species: Nocardia carnea
Strain Designation: S547
Strain history: <- H. Mauch, Hospital Zehlendorf-Heckeshorn; S547
NCBI tax ID(s): 37328 (species)
version 8.1 (current version)
General
@ref: 11755
BacDive-ID: 10656
DSM-Number: 44558
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Nocardia carnea S547 is a mesophilic human pathogen of the family Nocardiaceae.
NCBI tax id
- NCBI tax id: 37328
- Matching level: species
strain history
- @ref: 11755
- history: <- H. Mauch, Hospital Zehlendorf-Heckeshorn; S547
doi: 10.13145/bacdive10656.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Nocardia
- species: Nocardia carnea
- full scientific name: Nocardia carnea (Rossi Doria 1891) Castellani and Chalmers 1913 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Streptothrix carnea
@ref: 11755
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Nocardia
species: Nocardia carnea
full scientific name: Nocardia carnea (Rossi Doria 1891) Castellani and Chalmers 1913 emend. Nouioui et al. 2018
strain designation: S547
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 11755 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 11755 | GPHF-MEDIUM (DSMZ Medium 553) | yes | https://mediadive.dsmz.de/medium/553 | Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water |
culture temp
- @ref: 11755
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 11755
- geographic location: Berlin
- country: Germany
- origin.country: DEU
- continent: Europe
Safety information
risk assessment
- @ref: 11755
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Nocardia carnea strain DSM 44558 note copy 1 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536409 | 336 | ena | 37328 |
| 20218 | Nocardia carnea strain DSM 44558 note copy 2 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536410 | 336 | ena | 37328 |
| 20218 | Nocardia carnea strain DSM 44558 note copy 3 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536411 | 336 | ena | 37328 |
| 20218 | Nocardia carnea strain DSM 44558 note copy 4 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536412 | 336 | ena | 37328 |
| 20218 | Nocardia carnea strain DSM 44558 note copy 5 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536413 | 336 | ena | 37328 |
| 20218 | Nocardia carnea strain DSM 44558 16S ribosomal RNA gene, partial sequence | JN041598 | 462 | ena | 37328 |
External links
@ref: 11755
culture collection no.: DSM 44558
straininfo link
- @ref: 79926
- straininfo: 113672
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 11755 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44558) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44558 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 79926 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID113672.1 | StrainInfo: A central database for resolving microbial strain identifiers |