Strain identifier
BacDive ID: 10646
Type strain: 
Species: Nocardia brasiliensis
Strain Designation: N 64, Ts 23105 (768)
Strain history: <- K. P. Schaal; N 64 <- M. Tsukamura; Ts 23105 (768)
NCBI tax ID(s): 37326 (species)
version 9.2 (current version)
General
@ref: 10670
BacDive-ID: 10646
DSM-Number: 43009
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Nocardia brasiliensis N 64 is a mesophilic human pathogen of the family Nocardiaceae.
NCBI tax id
- NCBI tax id: 37326
- Matching level: species
strain history
- @ref: 10670
- history: <- K. P. Schaal; N 64 <- M. Tsukamura; Ts 23105 (768)
doi: 10.13145/bacdive10646.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Nocardia
- species: Nocardia brasiliensis
- full scientific name: Nocardia brasiliensis (Lindenberg 1909) Pinoy 1913 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Discomyces brasiliensis
@ref: 10670
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Nocardia
species: Nocardia brasiliensis
full scientific name: Nocardia brasiliensis (Lindenberg 1909) Pinoy 1913 emend. Nouioui et al. 2018
strain designation: N 64, Ts 23105 (768)
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 10670 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 10670 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf | |
| 10670 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf |
culture temp
- @ref: 10670
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68379 | 17306 | maltose | - | fermentation |
| 68379 | 16899 | D-mannitol | - | fermentation |
| 68379 | 65327 | D-xylose | - | fermentation |
| 68379 | 17634 | D-glucose | - | fermentation |
| 68379 | 16199 | urea | - | hydrolysis |
| 68379 | 4853 | esculin | + | hydrolysis |
| 68379 | 17632 | nitrate | + | reduction |
| 68379 | 28087 | glycogen | - | fermentation |
| 68379 | 17992 | sucrose | - | fermentation |
| 68379 | 17716 | lactose | - | fermentation |
| 68379 | 16988 | D-ribose | - | fermentation |
| 68379 | 5291 | gelatin | - | hydrolysis |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68379 | beta-glucosidase | + | 3.2.1.21 |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
| 68379 | alpha-glucosidase | + | 3.2.1.20 |
| 68379 | beta-galactosidase | - | 3.2.1.23 |
| 68379 | alkaline phosphatase | + | 3.1.3.1 |
| 68379 | catalase | + | 1.11.1.6 |
| 68379 | gelatinase | - | |
| 68379 | urease | - | 3.5.1.5 |
| 68379 | beta-glucuronidase | - | 3.2.1.31 |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
| 68379 | pyrazinamidase | - | 3.5.1.B15 |
API coryne
| @ref | NIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10670 | + | - | - | + | - | - | + | - | + | - | - | - | - | - | - | - | - | - | - | - | + |
Safety information
risk assessment
- @ref: 10670
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Nocardia brasiliensis strain DSM 43009 note copy 1 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536400 | 335 | nuccore | 37326 |
| 20218 | Nocardia brasiliensis strain DSM 43009 note copy 2 16S-23S ribosomal RNA intergenic spacer, complete sequence | AF536401 | 334 | nuccore | 37326 |
External links
@ref: 10670
culture collection no.: DSM 43009
straininfo link
- @ref: 79916
- straininfo: 50124
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 10670 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43009) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-43009 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 68379 | Automatically annotated from API Coryne | |||||
| 79916 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50124.1 | StrainInfo: A central database for resolving microbial strain identifiers |