Strain identifier

BacDive ID: 10600

Type strain: Yes

Species: Gordonia australis

Strain Designation: A554

Strain history: IFM 10859 <-- DSM 44454 <-- M. Goodfellow <-- N. P. Ferreira and R. P. Tracey CSIR A554 ("Rhodococcus australis").

NCBI tax ID(s): 339863 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 11781

BacDive-ID: 10600

DSM-Number: 44454

keywords: 16S sequence, Bacteria, mesophilic

description: Gordonia australis A554 is a mesophilic bacterium that was isolated from riverbank soil.

NCBI tax id

  • NCBI tax id: 339863
  • Matching level: species

strain history

@refhistory
11781<- M. Goodfellow, Univ. Newcastle; A554 <- N. P. Ferreira and R. P. Tracey (Rhodococcus australis)
67770IFM 10859 <-- DSM 44454 <-- M. Goodfellow <-- N. P. Ferreira and R. P. Tracey CSIR A554 ("Rhodococcus australis").

doi: 10.13145/bacdive10600.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Gordoniaceae
  • genus: Gordonia
  • species: Gordonia australis
  • full scientific name: Gordonia australis Schneider et al. 2008

@ref: 11781

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Gordoniaceae

genus: Gordonia

species: Gordonia australis

full scientific name: Gordonia australis Stainsby et al.

strain designation: A554

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 11781
  • name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/535
  • composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
11781positivegrowth28mesophilic
67770positivegrowth28mesophilic

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
11781riverbank soilSouth Afrika, PretoriaSouth AfricaZAFAfrica
67770Soil at the riverbankPretoriaSouth AfricaZAFAfrica

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#River (Creek)
#Environmental#Terrestrial#Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_2883.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_85;97_1820;98_2231;99_2883&stattab=map
  • Last taxonomy: Gordonia malaquae subclade
  • 16S sequence: DQ150570
  • Sequence Identity:
  • Total samples: 2858
  • soil counts: 282
  • aquatic counts: 1583
  • animal counts: 959
  • plant counts: 34

Sequence information

16S sequences

  • @ref: 67770
  • description: Gordonia australis strain A554 16S ribosomal RNA gene, partial sequence
  • accession: DQ150570
  • length: 1430
  • database: ena
  • NCBI tax ID: 339863

GC content

  • @ref: 67770
  • GC-content: 67.8
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 11781

culture collection no.: DSM 44454, ATCC 35215, JCM 14872, IFM 10859

Reference

@idauthorscataloguedoi/urltitle
11781Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44454)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44454
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta