Strain identifier
BacDive ID: 10600
Type strain: 
Species: Gordonia australis
Strain Designation: A554
Strain history: IFM 10859 <-- DSM 44454 <-- M. Goodfellow <-- N. P. Ferreira and R. P. Tracey CSIR A554 ("Rhodococcus australis").
NCBI tax ID(s): 339863 (species)
General
@ref: 11781
BacDive-ID: 10600
DSM-Number: 44454
keywords: 16S sequence, Bacteria
description: Gordonia australis A554 is a bacterium that was isolated from riverbank soil.
NCBI tax id
- NCBI tax id: 339863
- Matching level: species
strain history
| @ref | history |
|---|---|
| 11781 | <- M. Goodfellow, Univ. Newcastle; A554 <- N. P. Ferreira and R. P. Tracey (Rhodococcus australis) |
| 67770 | IFM 10859 <-- DSM 44454 <-- M. Goodfellow <-- N. P. Ferreira and R. P. Tracey CSIR A554 ("Rhodococcus australis"). |
doi: 10.13145/bacdive10600.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Gordoniaceae
- genus: Gordonia
- species: Gordonia australis
- full scientific name: Gordonia australis Schneider et al. 2008
@ref: 11781
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Gordoniaceae
genus: Gordonia
species: Gordonia australis
full scientific name: Gordonia australis Stainsby et al.
strain designation: A554
type strain: yes
Culture and growth conditions
culture medium
- @ref: 11781
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 11781 | positive | growth | 28 |
| 67770 | positive | growth | 28 |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 11781 | riverbank soil | South Afrika, Pretoria | South Africa | ZAF | Africa |
| 67770 | Soil at the riverbank | Pretoria | South Africa | ZAF | Africa |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #River (Creek) |
| #Environmental | #Terrestrial | #Soil |
taxonmaps
- @ref: 69479
- File name: preview.99_2883.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_85;97_1820;98_2231;99_2883&stattab=map
- Last taxonomy: Gordonia malaquae subclade
- 16S sequence: DQ150570
- Sequence Identity:
- Total samples: 2858
- soil counts: 282
- aquatic counts: 1583
- animal counts: 959
- plant counts: 34
Sequence information
16S sequences
- @ref: 67770
- description: Gordonia australis strain A554 16S ribosomal RNA gene, partial sequence
- accession: DQ150570
- length: 1430
- database: nuccore
- NCBI tax ID: 339863
GC content
- @ref: 67770
- GC-content: 67.8
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 11781
culture collection no.: DSM 44454, ATCC 35215, JCM 14872, IFM 10859
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 11781 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44454) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44454 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |