Strain identifier
BacDive ID: 10380
Type strain: 
Species: Nannocystis exedens subsp. cinnabarina
Strain Designation: Na c1
Strain history: <- H. Reichenbach; Na c1
NCBI tax ID(s): 1366054 (subspecies)
General
@ref: 5427
BacDive-ID: 10380
DSM-Number: 14641
keywords: 16S sequence, Bacteria, mesophilic
description: Nannocystis exedens subsp. cinnabarina Na c1 is a mesophilic bacterium that was isolated from soil with decaying plant material.
NCBI tax id
- NCBI tax id: 1366054
- Matching level: subspecies
strain history
- @ref: 5427
- history: <- H. Reichenbach; Na c1
doi: 10.13145/bacdive10380.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Myxococcales
- family: Nannocystaceae
- genus: Nannocystis
- species: Nannocystis exedens subsp. cinnabarina
- full scientific name: Nannocystis exedens subsp. cinnabarina Reichenbach 2005
@ref: 5427
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Myxococcales
family: Nannocystaceae
genus: Nannocystis
species: Nannocystis exedens subsp. cinnabaria
full scientific name: Nannocystis exedens subsp. cinnabaria Reichenbach et al.
strain designation: Na c1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 5427 | AGAR WITH E. COLI AS FEED (DSMZ Medium 942) | yes | https://mediadive.dsmz.de/medium/942 | Name: AGAR WITH E. COLI AS FEED (DSMZ Medium 942) Composition: Agar 15.0 g/l CaCl2 x 2 H2O 1.0 g/l Distilled water |
| 5427 | VY/2 AGAR (DSMZ Medium 9) | yes | https://mediadive.dsmz.de/medium/9 | Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water |
culture temp
- @ref: 5427
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 5427
- sample type: soil with decaying plant material
- geographic location: Rhodos
- country: Greece
- origin.country: GRC
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Decomposing plant |
taxonmaps
- @ref: 69479
- File name: preview.99_31041.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_2095;96_15187;97_18549;98_23096;99_31041&stattab=map
- Last taxonomy: Nannocystis
- 16S sequence: KF267739
- Sequence Identity:
- Total samples: 18
- soil counts: 9
- aquatic counts: 2
- animal counts: 2
- plant counts: 5
Safety information
risk assessment
- @ref: 5427
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Nannocystis exedens subsp. cinnabaria strain DSM 14641 16S ribosomal RNA gene, partial sequence
- accession: KF267739
- length: 1483
- database: ena
- NCBI tax ID: 1366054
External links
@ref: 5427
culture collection no.: DSM 14641
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 5427 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14641) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-14641 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |